| Id Trinity | FTRINITY_DN51279_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_261672 |
| Sequence | AAACCCAGTCAAAGTCTATAAAAACAAAAATATCATTCTTTGATAATGCAACATTCCTAGCATTTTCTTATAGAAACATTGTCAACTTCAAGTCTTCTCT CCCAAACAAACTTCTATGCTTCACAATTTTGAGTTGTCTCTTCTTCTATGAGGGAAGAATAGTTGCAATTTGCTAGTGCATCAGTTTCAACTTCTTGACA ACAAACAGAGTTCGGCTTACGCGATTTTATTAGAGAATTCAGTAGGAATTGTATACTATGGTGGGATTGGAACTCATACCCATAGGTACTATCTTGGCTG TGCTAACAAATCAGGTGTTGAAAACAGCTCATGCAGCAGCTGATGTTCTTATTGGTAAAGAAAGTTTCAAGGTCCTTTCAAAACACCTGTTTGATATTGA ACCGGTGCTAAAGGAATTACAGCGTCAGGAATTGAATGAGTCTCAAGCTGCAAGGGTTGCCCTGGAGTCTCTTGAAGCAGATGTCAAAAAGGCGAATAAC TTGGTTGAGAAGTATAGGAATCGCGGCCGTTTTTACTTGCTGGTTAAGTGCAGATCCATAGTGGAAGAGGTTGAACAGGTCACAAGGGATATTGGAAGGT CTCTAGCTGCACTTTCTATTGCAAATACCGAGGTCCTATCGAGAATCTCTGATCAGGTTAATAGGCTGCAGAACGAGATGCAAAGGGTGGAGTTTGAGGC TTCACAATCTCAGCTTCAAATTGTTGACAAGTTGAACAATGGACTAAGAGAACAGAAACTAGATCAGGCTTTTGCGAATGACATGCTTGAAGAGATAGCA AGGGCAGTTGGGGTGCCAATAGAATCGTCCGAGATAAGCAAAGAGTTGGCCAGCATTAGGAGGGAAAAAGAAGAGGCTGCCAACAGAAAAGAAAGAGCTG AGTTTATTTTCTTGGAGCAGATCATTGAGTTACTCTCTCGAGCTGATGCAGCAAGGGATTATGAAGAAGTTATGAAACAATACTTCGAAAGGGTTCTGGC GATAGAGAGATATGATTCAAGGGAAAAGTATATCCAGCCACTGAATTCTTTCCTTTGTTGCATAACTGGAGCTGTTATGGTAGACCCTGTCAGCCTTTGC ACTGGTACTACATGTGAGAGATCAGCTATTGAAGGTTGGTTTTATGATGGCAACATGACTGACCCAGAAACAAACGAGGTTCTTGAAGATTTTACATTGA GGTCTAACATTCCATTACGACAATCCATTGAAGAGTGGAGAGAACTTAATTACTGTCTTGTAATAAGGTCTGTCAGGGAAAACCTATTATCAAATCCTGA CTTATATGTGGAAGAATCTCTGAACCAAATTCAAGCTCTCATAGCAGAGAACTCTATTAACAAGGATTGGATTTCTAGTGGAGGACTTACTGATAGTATT ATATATATCCTTGGGATCTCTGATAAGAGAGATGTGAAGATGAATATTCTAATTACTTTGAGGCATGCTGTAGAGGGCCATGTAAGAAACAAGGAGAAAG TAGTTCAATCAGTAGGATGGGATCAAATTATTTCCTGCTTAAGGAGTGACACTAGTGTTTCAAAGGAAGCGATAGATTTGCTATATGAGTTGCTTCAACA TCGATCTGGTTGGAATGAATGTTACTGCAAAAAGCTCTCTGAGAATAGCAATGCAGTTCTTTTTCTTGTCACCCTTCTCAAGGGTCCTGCTGCTAATTCG TCTTCAGCTGAGATTGCAGAAAAGATTTTGATGAAGCTTTTTGAAGTAAACGAGGACACCATTATAACTGCTGCTAATTTTGGCTGGTATAAACCACTTA TTGATCATATGATTCAAGGTATGAATATAGACGATTTTGTAGTTGTTACTATGTTTATTTTGATTGGATAGAAATATTTCATTTTGTTGATGGTTGAAGA TATCATTGACACAGAAAGGACAAATATGCTATGTCATCTAGTTAGCTGAGGAAATACAGAATCATCCTAAATTGTTTATGTTATTTGGTTGGAAAATGCA TGCTTATTAAAACAGCAGTAAAATCATCTGTAGATATCATTGTTTCTTAGCAAGTGGTATTTGATCTCTTCCTATTCCATGTTCTAGATGACTATCCCTA TAAACTACTTGTATAACCTGTCAAAATGTTCAAGTGATGCATGTATCTTCTTGGGAAAAAATAGCTTGCTTAAAACATGGCAAGTCATTTTTTATGGTGC ATGACGATTCATCGATTTTGTTGTGTTTGTTTACATAGTAAAATTGAGACACTTGATTTCGAAATTGGACAATTATGCCTTAATGATCTCAAATTTACAA TCCATATGGAGTTATTTGTCCTTGTTTGTCTTGTCAGGACCGGATTCAAGAATACCAATGGCGAAAGCCATAGTTAATATGGATTTGAATGATTTAAACT TGGAACTCGTTGGCAAGGAAGGAATTATTCGTCCATTGCTAGAAATGTTATCTGGAAATATCGAATCAAAAGAAGTGTCTTTATCAGCACTGGTTAAACT AGCAGGATGTCGTGCCAACAAGGGAATCATTGCTGCATCAGGAGGTGTTCCTATTATTCTAGATTTAATGTTCTCTCCTCGAATCCGAACATTCACTACT GTAAAATGCTCTGAAATCCTTGAGAAGCTTTCTTGTGACGAGGATGGAATTGATTTCTTCGTTGATGGTGAAGGGAAACAACTAGAGTTAGATTCCATTA TCACCAATTTGCTAGCTCTTCAGCAGTGGTCCAACTCAAGCAATGACTTCCGCAAGCCTGCTCTACGCGCTCTTCTTGGAATTTGCAAGTTTGAGAGTGG TTTAGTTAAGAAGGCAATACTAGCAGCAAATGGTGTATCTCTAATTCTTTCACTTCTCGATGATTCTGATTCAGAAATCCGTGAGATAGCTATAAACCTT CTCTTTCTTTTCTCTCAGCACGAGCCAGAAGGGGTAGTTGAATACCTCCTCAGGCCTAGAAGGCTTGAAGCATTGATTGGTTTTCTTGAGAATGATGACA ACAATGATGTAAGGATGGCAGCTGCAGGTTTACTAGCTAACCTTCCAAAATCAGAAAGAGAACTAACTGTGAAGTTGATTGAATTAGGAGGACTTGATGC AATCATAAGCATTTTGAAAACTGGCACAATGGAAGCAAAAGAAAATGCTCTTAGTGCACTCTTCAGGTTCACTGATCCTACATATATCGAGTCGCAGCGC GATTTGGTTAAACGCGGAATATACCCTCTGCTTGTAGATTTTCTCAATAACGGCTCAGTCACAGCAAAGGCAAGAGCAGCAGCATTCATCGGTGATCTCT CTATGAGCACTCCGAATCTCACAGTTGTTTCCAAATCACCTGGCTGCTGGTTTTTCAAGCCATCAAGAGTACATTTATGTTCAGCTCACGGTAGCGTATG CAGTGTAAGTCACACATTCTGTCTATTAGAAGCAAATGCTTTGCCTGGTTTGGTAAAGCTTTTGAATGATGAGGTTCATGCAACTGCTATTGAAGCAATA CAAACACTTTCGACATTGGTTTTGGAAGAGTTTCCTCAAAGAGGTGCTCACGTGTTGCACGATTCTAATGCGATAAGACCCTTATTAGACATTTTGAACT GGGGAACTGATTCTCTCAAAGCAGAAGCTTTAGGACTATTGGAGAAGGTGTTTGTGTCAAAGGAAATGGTTGAATCCTACGGAGCAACAGCTCGGTTACG CCTAGTTGGTATCACTGGTATGAATATATATGGTGATGGCCACCTTAGGAGAAAAGCTGCTAAGGTACTCTCGTTGCTCGAACGTTATTCAAGATCATCA TCAGCTGCAATATCTGGAATTTTGGAGTAAAGCTATAATTCCCTCGTTGGAACAATTTGCTTCAACATGTCACCCAATTTATATTAGATATTTGCCCTGG CCAAATGGTCTAATTCTACTATATAAAGTTCCTATTGAAGTTCAAATGCATTCTCTGTATTTTCCTTTTTGTATGGACAATTCTATCAAACACACAAAAA ACAACTGCCTACACGAGACATGATTCATACGTCTGGCTATTTACATTTTACATCGACCGATGATCCATCCATCTCAGTGTGAGTAGTGATTTCCAGGAGT ACATAGAATTTCCCTTTGTATTCTCACATTTCTTTCTATGATATTTTTGTTACTTAAAAATCCAAGGTACCTTCAAAATGAATTAGGACAGGTTTTTGCT CAGTTTGCAAATTGTAATTAGATCTTTGTAAGTGGAAGCCAGTAAAAGTAGCATCTTTTCTCATATGTTTTGAACTTCTCAGCCTTCAAAATTGAAGTTG GATGATAGTTATCAACACATGTAATTGTCAACAAGCTAGCTGGTTCATTATGCTATTTGTGGTTAGCATGTGACTATGCATCAACTTGGCACACAGATCA CCTAATAAAGGGGATAGTGCTATTACTACATAAACCAAAACTCACTAGTCACTACAGTGCATTGGGGCAGATTTTCATACACATTGCTATTCACTTTCTT TTTCATTATTTGACGTCCGGAGTAGGGCACATATCTTCTATCGTAAGATGTGTATCACTTCATGTACTCTTACATTTTTATTTGTTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_21722; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_261672
| Blastp | U-box domain-containing protein 44 from Arabidopsis with 29.06% of identity |
|---|---|
| Blastx | U-box domain-containing protein 44 from Arabidopsis with 29.06% of identity |
| Eggnog | U-box domain-containing protein(ENOG410XRTN) |
| Kegg | Link to kegg annotations (AT1G20780) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449840.1) |
| Pfam | U-box domain (PF04564.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |