Id Trinity | FTRINITY_DN51303_c0_g2_i1 |
---|---|
Name Transcript | Ll_transcript_11816 |
Sequence | GAGGAACCATCTGGGCGTGTAGAAATGAGGAAGCCAGAGCAGTGTGGTAAGAACAACAGCAATAAGCTTAGGAAAGGGTTGTGGTCACCAGAAGAAGATG AAAAGCTCATGAACTACATAATAAACAATGGACAAGGTTGTTGGAGCGATGTGGCAAGAAATGCTAGCTTGCAAAGGTGTGGCAAAAGTTGTAGACTTAG ATGGATTAATTATTTGAGGCCTGATCTTAGAAGAGGTGCATTCTCACCCCAAGAAGAGGAACTCATCATCCATTTGCATTCCCTTCTTGGCAACAGATGG TCTCAAATAGCATCACGTTTGCCCGGGCGAACAGACAATGAAATCAAGAATTTCTGGAATTCAACAATAAAGAAAAGACTTAAGAACAACCAAATTTCAA CTACCACGACCTCAGCTTCACCAAAACTGTGCAACCCACAGTCTCACGAGCTTAACAAAGACCACAACAACATGGGAGGGTTTATTTCTACGCAACATAA TCAACATGCAGGATTCATGCCTATATTCACTTCATCTCTATCATCAACAATGACTAACACCAGAAATATTGAAGGGTTGCCTGTGCTAGATTATGGACTA AACATGCAAGTTGATGGAGGATATTTCAATGGCACAGGACAATGCTTTGATGATAATAACAAAAGCTTTTATTTAGAAAATGATGGGATCTTTGGGAGTG TAAATAATATTGGGATAGAAGGGGATATGTTTGTTCCTCATCTTGAGAGTGCTAATACTATTAATACTACTGATCATAATAACCATCACATAGTGGACAA TATAACTTGCAAGAGAGAAACTAACAATAATAGTACTTACTTTGATGACATAAACAACATCCTTAATAACTGCAATGTTAGCAAAAATAAGAGATGTGAA AATAGGGCTGGGGGGAATTTATTTCAAGAAGAATTAACTATAGGAGAGTGGGATTTGGAGGAGTTGATGAAAGATGTTTCCTACTTTCCATTTCTTGACT TTTCTTAACTATGCATTTGTGTTATCAAAAGTGAAAATATTGGATGGGTTAACATAGCTTGTAATATTTGTATTTTTTCAATTATACCATATTAAAAGTG AAAGTTCCCTGGTCAAATAAAAACCAGACATGTATTCCTGAGTATCCATTAGAGACCATGTAATATATTTCGT BLAST |
Tissue | flowers |
Gene name | LI_gene_21778; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_11816
Blastp | Transcription factor MYB83 from Arabidopsis with 44.35% of identity |
---|---|
Blastx | Transcription factor MYB83 from Arabidopsis with 45.21% of identity |
Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
Kegg | Link to kegg annotations (AT3G08500) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457464.1) |
Pfam | Myb-like DNA-binding domain (PF00249.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |