Id Trinity | FTRINITY_DN51323_c0_g1_i1 |
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Name Transcript | Ll_transcript_11819 |
Sequence | ATACTTGTTCCATCAGAATTTGAGATCTGGCCATGGCCTCCATTGCCCTCACCGCCTCCTCTTTCCGCCCTTCCCTCCGCTCCCGCTCCTCCTCCACCAG ATCCCAACCACTCCTCCATTACACTCCTTCCACTTCTCTCAATTCCAATTCCCTCTCACTTAAACGCAACCGTTTCACCACCACTCCTCTCATTTCCTCC AATTCCAAACACCTCACTCTAGTAAAGGCATCGTCCTCAACCGCTGCAGCTTCCGTTACTCCAGCTCCAGTTCCACCTAAGCCATCGCAAGGTGCCGCAA TTAAACCCTTACTTGCTTCTATTGCTACAGGTGTCATTCTATGGTTCGTTCCTGTTCCCGCCGGCGTTTCTCGTAATGCGTGGCAGTTACTCGCTATTTT CCTTGCTACTATCGTCGGTATTATTACTCAGCCACTTCCTCTTGGCGCTGTCGCAATTTTAGGTCTTGGTGTTTCGGTTCTCACCAAAACACTTCCCTTC GCCGCCGCATTCTCCGGCTTTGGCGATCCAATCCCGTGGCTTATTTGTTTCGCTTTCTTCTTCGCCAAGGGATTCATTAAAACCGGACTTGGTAACCGTG TCGCTTACCAATTCGTGTCACTCTTCGGTAGCTCTTCGTTAGGGTTAGGTTATAGTTTAGTTTTCAGCGAAGCGTTGTTGGCGCCGGCGATTCCTTCGGT TTCGGCTAGAGCAGGTGGAATTTTTCTTCCTTTGGTTAAGTCTCTCTGTGTGGCTTGTGGTAGTAACGTCGGCGATGGAACGGAGGAGAAGTTGGGGTCG TGGTTGATGCTTACTTGCTTTCAGACTTCGGTGATTTCATCGGCGATGTTTTTGACTGCAATGGCGGCAAATCCACTGTGTGCTACTCTCACTCTGAACT CGATTAATCAGACAATTGGGTGGTTGGATTGGGCCAAGGCTGGGATTGTTCCTGGTTTGGTGTCCTTGGTGTTGGTGCCGTTGATCTTGTATGTTATCTA TCCGCCGACACTCAAGAGCAGCCCTGATGCACCAAAGCTTGCTAGGGAGAAGTTGCAGTTGATGGGGCCTATGACTGGTCATGAGAAGATCATGACTGCG ACACTACTTCTTACGGTGGGACTGTGGGTTTTTGGAGGAGTTCTTAATATAGATGCTGTAACTGCTGCCATTCTTGGATTATCTGTACTCCTTGTCACGG GGGTTGTTACATGGAAGGAGTGCTTAGGTGAGGGAGTTGCCTGGGATACCCTGACTTGGTTTGCTGCTCTCATTGCAATGGCTGGGTATCTGAACAAATA TGGTCTCATTTCTTGGTTCAGTCAAACCGTTGTCAAGGTATTATTTTCTGACTCCTCTTCCCTCGGGTTAATATTTAGTCGGCCTTACTATGCTGCTCCT GGTAATTTATCTTCACGATTTTTCATTTAATTTCTTGATAGCATTTTCATACGGTTAATTGGTTATAGTTTGTTTACTTCATTCAACCAAAACAACCAAA CACAGGAACCTTTTCATGTTTTTAAATACACGCAAGCTAAATAAGATTTGAAGTAGGTATATATGTATTTGTTTGACACACTCATCTCTATCGTAAAATG GTTGTTTATGTGGGTATGTCTGGCTTTTATTTTGTCCATATGCGGTCTGATTAATTCAAAGCATTTAAAAACTTCAAAGAATATCAAATTATGTCAGCAT AAGTTGTTAGCCCCTAAGAGTGCAAACGCTTGCATACCATTTTTATATTCAATATGGGTCATGTACTTTATACACAAG BLAST |
Tissue | flowers |
Gene name | LI_gene_21814; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_11819
Blastp | Dicarboxylate transporter 1, chloroplastic from Arabidopsis with 77.65% of identity |
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Blastx | Dicarboxylate transporter 1, chloroplastic from Arabidopsis with 86.86% of identity |
Eggnog | Transporter(COG0471) |
Kegg | Link to kegg annotations (AT5G12860) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448599.1) |
Pfam | Sodium:sulfate symporter transmembrane region (PF00939.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |