Ll_transcript_12138

• Id Trinity: FTRINITY_DN51343_c0_g1_i2
• Name Transcript: Ll_transcript_12138
• Sequence: TTTTCTCTTTTTCTCATACTAAATAATACAAAAATCTACTCTCTTTTGTTTGCACACTTTTCTTTCTCATGCTTCTCTTTCTCCATTTTCTCTTCTCATT TTCTACTATTCAATCAAATAAAGCTTGTTATGCATATTGGGCCTGCTCATTAGGACCAAATTTTAAGCCCCATTATTTTGATGGAGGTTGAAGGCTTGAA GCTACAAAAGTACAAAGCGATAAACAGAAAAACGGCATTGAACAAACGAAACGCAGTGGATAACATAACAAGGAAACAACACTGAACCAAAAACACAGTA ACACCACCACGAACGAATTCACAGTTCCAGAAATTTAAAATTATTATTTATCATAAAAATTTGTTGTTATTGAGAATCAAATCCAACAAATGCTAAATGG CAACGACGCTTTTCACTTTCCATCTCTCTCGCACTTTCCGCACATCACTTTTTTCCGCTTCATCCCTTTCCACTCTTCGTGACGTCACTTTCCGACGCAA CTTCCCCCGCCGTCTCTCCTTCTTCGCCACCACTTTTCCCCGCCGCTTCTCTGCTATCACCACCGCTTCAATCTCCCGAGAGTTGGATAATGGAATCGGA GCAGTGGATGAAAGATATGATGTGATTGTAGTTGGAGGTGGACACGCAGGGTGCGAAGCAGCACTTGCTTCTGCACGTTTGGGGGCAAGGACTCTTCTTC TTACACTCAATATTGATCGTATTGCATGGCAGCCTTGCAATCCAGCAGTTGGTGGGCCTGCAAAGTCCCAACTGGTTCATGAGGTGGATGCACTAGGTGG TGAAATTGGGAAGATTGCTGATAGATGTTACTTACAAAAACGTATACTCAATGTCTCAAGAGGTCCTGCAGTTCGTGCACTACGTGCTCAGACCGACAAA AGGGAGTATGCCTTGGAAATGAAAAATGTAGTGGAAAGCACTCCAAACCTTTCTATCCGAGAGGCTATGGTCACAGATCTTTTACTGGGGAAGAATGATA ATGTGGAAGGTGTTTGTACTTTTTTCGGAATGAAATTCTATGCTCCATCTGTTATTCTCACAACAGGAACTTTTATGAGCGGCAAAATTTGGGTTGGCAG AACTTCTATGCCTGCAGGAAGAGCTGGCGAGTCTGCTTCACATGGATTAACTGAGAACTTACAGCAACTTGGTTTTGAAACTGATCGGTTGAAAACTGGT ACTCCAGCCCGGGTGGATATTCGCACTGTAAATTTCTCAGTATTAGAACCTCAGCATGGAGATGAAGAGGTTCTTCCATTTAAACTTATGTGTCGGCTGG TTTAGTTTTGATCCTGATGTCCATATCGAACGAGAACAGATGTGCTGCTACCTGACTCGCACTACAAGCATTACTCACCAGATAGTAAGAGAGAACTTAC ATGAAACTCCCACCTATGGAGGATGGATTGAAGCTAAAGGACCTAGATACTGCCCTTCTATCGAAGATAAGATTGTGAGATTCCAAGATAAAGAGTCTCA TCAAATATTTCTTGAACCCGAGGGTCGCCATGTGCCTGATCTCTATGTGCAAGGGTTCTCCACGGGTTTGCCAGAGAGACTGCAGTTACCTTTGCTGAGA ACTTTGCCTGGACTTGAGAACTGTTCAATGTTGAGGCCTGCATATGCTGTGGAGTATGACTATTTACCTGCTCATCAATGTGCTAGGTCTCTTATGACAA AGAAAATACAAGGGTTGTTCCTCTCTGGTCAGATAAATGGAACTACAGGGTATGAAGAAGCTGCAGCACAGGGCATCCTTTCTGGCATCAATGCTGCTAG ACATGCAGATGGTAAGCCGCTCATTGTTCTTGAGAGGGAGAGCAGTTACATAGGAACATTGATTGATGATCTAGTTACCAAGGACCTTCGAGAGCCTTAC CGCATGTTAACAAGCCGCTCAGAGCATCGGTTACTGTTGAGATCTGATAATGCCGATAGCCGTCTTACTCCTTTGGGTCGTGAAATTGGGTTGATAGATG ATAGACGCTGGAAACTGTACCAGGAGAAGCAGGATCGGATTTCTGAGGAAAAGAAGCGATTGAAAAGTGTCAAAATTTCAGGAGGAGATTTGGCTGCTGA AGTTACTCGTCTGTCTGGTCAGCCGGTGAAGAATGCTTCCACATTGGAAAGTCTTCTTAAGAAACCACATATACAGTATGAAGTTCTTGATAAGCATGGT TTTAGTAACAAAAACTTGTCGAGAATGGAGAAAGAATGTGTTGAGATCGACATTAAGTATGAAGGTTTCATCTTGCGCGAGCAAATCCTACTAAAACAGA TGGTTACTAAACAACATAGACCACTTCCTGAAGACTTGGATTACTATGCAATGACGACTTTATCTCTTGAAGCACGTGAAAAACTTTCTAAGGTTAGGCC ACAAACCATTGGTCAGGCAAGCAGAGTTGGTGGGGTGAGCCCAGCTGATATCACTGCTCTACTCATTGTGATAGAATCCAATAGGAGGAAAGCTCAAGAA CAGAGGAGGCACAAAATGTTGAATGCCATTCGAACAGATAACCAAGATGAGGTGCCTGAAGTTTCTTTGACTGAAACAGTCAGTACTGGATAAGTTTTCA TCTCATCCCACCATTCTGTCAATTTTGGAATTTAGCTGTGCCATATTGTATATGTCATGTGAAGACTACAAAATCCTAGATTAATAGATTAACAGAGAGA ATGGAAAAGAAATTGTGTGGCTTTAATATTTTGTTGTTGTCAATTTTATCCAATTTATGTAATGCTATTAAACAAATTATTTATTGAGGATATATAAATA CTAGTTAAGCTTTCTTTGGAAGAGCAGAGTGACTATAGGGAGAAAATGGTAAGAGAGAAGTTGAGAAAGACATAATTTCTCCTATTTGTTTGTGAAGCGA GAAAGGGGCTAGATAGTAAAAGTTGTATAAGACTTGCGATAAAAAATTTCTTCTGTAGTTTGTCTACAGTGAAGAAGGAAATATAATTTTGAATAAAATG TCAAAAATATATTTCGATTCTTTTTATTTTCACTGCTTGATAGTTTTGAATGTTAGGAATATAAATGAGTCTGTTTTGTATGTAGAAATATATTAGCAT
• Tissue: flowers
• Gene name: LI_gene_21859;
• Additional information: details;

Expression of Ll_transcript_12138

FPKM

• FPAB: 0.6
• FPNAB: 0.8
• LF1: 1.1
• LF2: 0.8
• LF3: 0.8
• LF4: 0.4
• UF1: 0.3
• UF2: 0.7
• UF3: 0.4
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_12138

• Blastp: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG from Synechococcus with 65.59% of identity
• Blastx: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG from Thermosynechococcus with 65.59% of identity
• Eggnog: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 (By similarity)(COG0445)
• Kegg: Link to kegg annotations (CYB_2823)
• CantataDB: Link to cantataDB annotations (CNT0001314)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464324.1)
• Pfam: Glucose inhibited division protein A (PF01134.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;