Ll_transcript_12143

• Id Trinity: FTRINITY_DN51343_c0_g1_i7
• Name Transcript: Ll_transcript_12143
• Sequence: GTTTGTTGGCATAAGATAGTGTGGTATAAACATCAGCTAGGTGTATACTTCAAAACATTTAAATCTTCACAACAATATGTACCTTATTTACAGTCATGAA ATATGTTACGTTGGGATTTCATTGGAAACTACTGTTTTATATAGTCTAGTAGGTTTGCAAATGTTAACTACAAATCTTAACTACTTGCAATTAGTGATCT TTATTATACTTTCTCTTAGCAAAATTTCCTCCTTTTTAATCTAGTAGGACTCCGTTATCATACTTATCCTCCAAACTTGTGTTCTTTCTTTTTAATAAAA TCTCAACGTTTTTATCAGGAGGAGATTTGGCTGCTGAAGTTACTCGTCTGTCTGGTCAGCCGGTGAAGAATGCTTCCACATTGGAAAGTCTTCTTAAGAA ACCACATATACAGTATGAAGTTCTTGATAAGCATGGTTTTAGTAACAAAAACTTGTCGAGAATGGAGAAAGAATGTGTTGAGATCGACATTAAGTATGAA GGTTTCATCTTGCGCGAGCAAATCCTACTAAAACAGATGGTTACTAAACAACATAGACCACTTCCTGAAGACTTGGATTACTATGCAATGACGACTTTAT CTCTTGAAGCACGTGAAAAACTTTCTAAGGTTAGGCCACAAACCATTGGTCAGGCAAGCAGAGTTGGTGGGGTGAGCCCAGCTGATATCACTGCTCTACT CATTGTGATAGAATCCAATAGGAGGAAAGCTCAAGAACAGAGGAGGCACAAAATGTTGAATGCCATTCGAACAGATAACCAAGATGAGGTGCCTGAAGTT TCTTTGACTGAAACAGTCAGTACTGGATAAGTTTTCATCTCATCCCACCATTCTGTCAATTTTGGAATTTAGCTGTGCCATATTGTATATGTCATGTGAA GACTACAAAATCCTAGATTAATAGATTAACAGAGAGAATGGAAAAGAAATTGTGTGGCTTTAATATTTTGTTGTTGTCAATTTTATCCAATTTATGTAAT GCTATTAAACAAATTATTTATTGAGGATATATAAATACTAGTTAAGCTTTCTTTGGAAGAGCAGAGTGACTATAGGGAGAAAATGGTAAGAGAGAAGTTG AGAAAGACATAATTTCTCCTATTTGTTTGTGAAGCGAGAAAGGGGCTAGATAGTAAAAGTTGTATAAGACTTGCGATAAAAAATTTCTTCTGTAGTTTGT CTACAGTGAAGAAGGAAATATAATTTTGAATAAAATGTCAAAAATATATTTCGATTCTTTTTATTTTCACTGCTTGATAGTTTTGAATGTTAGGAATATA AATGAGTCTGTTTTGTATGTAGAAATATATTAGCAT
• Tissue: flowers
• Gene name: LI_gene_21859;
• Additional information: details;

Expression of Ll_transcript_12143

FPKM

• FPAB: 0.5
• FPNAB: 1.8
• LF1: 0
• LF2: 0.8
• LF3: 0.4
• LF4: 1.2
• UF1: 0.7
• UF2: 0.3
• UF3: 0.7
• UF4: 0.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_12143

• Blastp: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG from Thermosynechococcus with 59.09% of identity
• Blastx: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG from Thermosynechococcus with 53.97% of identity
• Eggnog: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 (By similarity)(COG0445)
• Kegg: Link to kegg annotations (tlr0535)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464324.1)
• Pfam: GidA associated domain (PF13932.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;