Id Trinity | FTRINITY_DN51358_c0_g1_i2 |
---|---|
Name Transcript | Ll_transcript_11904 |
Sequence | TGAGTTTGGAATATATATTCATTAGTACCTGAAATCATGAACCACAAGCCATGGCATTGGAGGAAAAGATCTATGGAGAAGACAATCTTTGCAATGGACA AAGATGTTAGTCCTTCTACAATCATTGATGAAGAGGTACATAAACTTCCAATAGATAAGGAAACTGGTTGCGGAAGATCATCGAGGAGTCTAAACCGGAA GTCGGTAACAGTCCTACTTGATTGTCATGATGGAGATGAACCTTCATCAAAACATGCCCAAAAGTCCCAACCGGAAATTAGAGATGAAAGTGTAGGCAAG GAGACAGCAAAACAAGAAGCAGAATCTAGTGAAGATTTATATAGAGAAGTATCAGCTGAAATTGTTACTCTTCCCACTGATGCTAAACTGTGGGAACCTC TGCAGCCACTAAACTTTGTTCAAGAAGAACAAGGGCAAAGTTTGTCTGGTGCCATTCCAAACATATCAAAAGAGCATGAGAAGATTCACAAAGAGTTCGA AGAAAAGCTGAGGGAACAAAGTAAGAAGATATATGCTTTAACTGCTGAGAATACTAGTCTAACTAATGCCTTATTAGCAAAAGAGAAATCTATTGTAGAC CTGCTTAAATGTAAACAACAAGCAGATGCAGAGTTTGGTACACTTATGGCAAGGTTAGATTCCACGGAAAAGGAAAATGCTTTCCTAAGATATGAATTTC ACATGCTGGAGAAGGAACTCGAGATCCGGAAGGAGGAGATGGACTATAGCCGCCGGTATGCAGATGAATCACTTAAAAAGTATGTTGAGAATGCTCACAA AGCCTCAAAGTTGGAAGCTGAGTGTCAAAGGCTCCGTCTCACGCTGCATAAAAGGTCACCCGGTCCTGCTGGTTTGGTGAATACGAAGAATGAAGTTGGA ATGATGAGAAGACAGGCAGACATGAGAAGAAGAAAGTCAAGTCCTGCAAGGGATTTGATTTACAAAAACAATGACATTAGAAACTCTAGTGAAGTATCCG AAAAGACTATTGGCTTGATGATGAACCGTTTGCAAGATCTGGATGAGGAAAACAAGGCACTCAAAAGAATTTTAACCCAAAAAAACACTGAGCTAGATTC TTCAAGAGTTATGTATGTTGAAACAACCTCCAGATTATCACAGGCTGAGATTCTGCTTAGAAAGCTCTCGGAAAATCAGAAGTCCATAGAGCTAGAAAGG TGTTATCCCAATCCCACATCAAATGAGCTTCCTTTAATATCAAATTCTGACCTTGTTAGTGATGACGGAACTATCTCTTCCGGATCCTGGTTGAATGCTC GTATTCCAGAACGTTTAAGAACTTCAGAAGGTGCAAATCATAAGAACAATAAAGCCATTGAAGTTCCGGACATGAGTTTGATGGATGATTTTGTTGAGAT GGAGAAACGCGCTATAGTTTCTGTTGATCGATCTAAAAGAGAATACTGCTCAGATGTGAGTGGGAGGGAGCTAGTTCCAGTTGAACAAGATCTTGGCTTC AGTGGAAGGAAACAAGAGATCCAATTCAAATATACAACAGCTGAAAACCCCTTTGACTGGCTTCAGGTTGTTTTGAATGCGATTTTGGAGGAGAAACGCA TATCGAAACGAAGCCATGATGAACTGTTTGAAGACATAAAAATTGCTATGGGTTACATAAATTATCCAACTGCCTCTAAAATTGTTACACATCAAAACTC AAGGCATCCTAGAGAAGCTGATTCATGTTCTGTTGACAGTTTCAGTGGTGTTGCCGAACTAAAAAGCAACCGACATTTCGATTCTAGTTTGAGAAAGTCA GTCCATAAAATTATCAAGCTTATTGAAGGAATTGCTCCCAAGTCATCTGTATGCAAAAATTATCCAGATTGTTTGGAAGAGAACCAGCCTTCCAACATAT CTCAATCACTAGCATCCAAAGAATATTTTGTGCATGTTTTCCAATGGAAGCTTTCGGACTTGGACCCTCTTCTGCATCAACTTGTTCACACCTGCAAAGA TTTATTAACAGGGAGGGCTGATTATGAAAATTTTATTGAGGAAGTGGCATTTTCTTTGGATTGGAGCATTAATAACTGTGCCACCTCCACAAATTCTTCC ATTGCAAGGGATAAGATCAAGAAGCATTTTAGCTATTATCTGTCACAAAGTGAAAATGAAAGTCAAATAGATTTCGATGATAAACAATATTTTCACTCAC CCCAAGTTGCTTATCCGGATGATCGGTGTATGGTCTTCAACACGAGTAATAATCAATACGATCTCCGTGAAGAAAATATAATTTTGAAAGAAGATCTGAG GAAAGCAAAATCTGCAAAGGGAGACTTGGAAGCAAAGCTGCTATTAGTAACCGATGAGAGACAGAACTTGACAAAACAATTTCAAGAAGCACAAAACAGC ATCAAAGGTCTAGAATCAGAAATAGAGATACTGGAAGAATCCAAGAGAATAATTGAAGATCAGATTGAGAAACAAAAGCTGATAAATGAAGACCTTGATA CACAGCTTACGATAGCTCACGCCAAGTTAAACGGCATCTTTCAAAAAGTTTCGTCCTTAGAAGTTGAATTAGATGATAAAAAGAATTCCTGTGAGGAATT AGAGGCAACATGTCTTGAGCTTCAACTGCAGCTGGAAAGGTAATGACTTCTATTCTTCTTTTTTTCTTCTTGTTTGGTTTCTAGTCTTTTGTAATTCTCT TCTTCTTTGTTGGTTAATCAATATGGATTTGAGAACATGATCTTTTTTAACAGCATTGTGAAGAAGGAATCTCCAGCATATGCCAGACATGAAGTAGAAA AAATATATCAAACTGGATGGGAGATAACATCAGCTTCATCGAAGTTGGCGGAGTACCAAGAAACCATCCGAAACCTTGGAAAACAACTCAAGGCACTTGC TTCATCTAGTGAAAAAGTACTTCTTGACAGGGTTGTCTCTACAACAAGTAATGCGGCCATGGCAAATCCAACACAGAAGAAGAACTTGCTCAAGCGATGC TCTCTGCTCAATCACATGCAAGCCGAGGATGATGCTAAAGCCGGAGGAAGCCACAAGTCTGTCGAAAACGAAGAAACTAAAAGTGCTAAAGGTTCACTGA AGCCGCTTCTTCAGTGTGAAAACTATAGCGCAATGCAAACTCCTAAAATCATGGTTATTGCTCCAGGAACAGCTCTAAGTTCAGACCAAAATGATAGAAG CAATGCTGCGGGATCTTTGGCGATTGTAACGAATAAAAAACAAGGAGGCTTTGGTTTTATCAAGAAACTGCTCTTAAGAAGAAAGAAAAGGAAGAGCAAG TCAAAGCATGACTAAGAATTTAGAGAGACGGTTAAACTCTGCAGATTGTTCTATTCACCCTACTATGTTTGAATTCAGTGTTTAATAGATCATGGGGTAA CATGCTTGTATCTTTTTTTCGTTGGCAATGACTTCTTTGATTATTGGAGATTACTGAAGTTTGGGTTTGAGGCTTTAGTGAGAAATTTGTTGTAAATATT GCTGATGTACATATATATACGTTGCTTTATTGGTACTTGAGATTGAGTGGTGCTGATATATATATGGAATTGATTTTGCTTGCAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_21888; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_11904
Blastp | Filament-like plant protein 7 from Arabidopsis with 32.66% of identity |
---|---|
Blastx | Filament-like plant protein 7 from Arabidopsis with 32.88% of identity |
Eggnog | filament-like plant protein(ENOG410YBNS) |
Kegg | Link to kegg annotations (AT2G23360) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424175.1) |
Pfam | Filament-like plant protein, long coiled-coil (PF05911.10) |
Rfam | - |
GO | - |