| Id Trinity | FTRINITY_DN51363_c0_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_12166 |
| Sequence | GTTAAAGTTATTTTCTTTCTTGTTTGTTTGTTCGACTTGGTCATGCAAAATCTGAAACTCAATTTGTAATTCAGGTTGGTTGGTCTTTGTTTCCGCGTGA ACTAAAGAGAATTTCTGGTATGGAGGGAATCAACCTTAAAGAATAGAGAGATTATGAGATGGGACAATTGCTTTTTGTTCACCTTGCTTCTATGCGCTAG AGCTGTGGATTCTAATCCTAATATTTCTTATTCTAGCTCTAGAAGACCTCCCTTTGATGGGAACTGATAGTGGTGAAGACGTGGAGAGGTTACCAAATCC GCACTCTTTTAAGGTACATAGTAAAATGTGCATAGAACTCATGAAATTAGTTGATAGAATCTCAAGTATATTTCCAGACATAGAGACGGCACGGCCTGGA TGCTCATCAGGAATACAGGCACTTTGTTTGCTGAACAACGCAATTGATAAAGCCAAACTACTTCTGCAACATTGCTCTGAATGCAGTAATCTCTACCTGG CTGTGACAGGGGATACAGTACTCTCGAGATGCCAAAAGACAAGAATATCACTAAAGCAAAGCTTAATCCAGATTCAGGGAATGCTTCCAGTTCTGTTGGC TGCAGCGGTTAGTTTCCTACCCAATATACATTGCCGCAGATTCTTTTCTTAAGTTGCATCCAGAAAATCAGGTGCTTCTCGTTGATTAGTGGGCTTGCTG GTGTCATTGAATTATTACGATTCTTTTTACTCGAGCTTCAAGCTGTCAAATAAAGTGTGATTTGTTTATTAAAAATTACAAACAAACAATATCCATACAA TGCTGGAAGTTTATTTTCTAGTTTAGATTAATGTTGATAGCCACATATTTCTGGATAGTTATTTTTGTTATGAAACAACAGCACATTAATTAGCCTCGTC TTATTATATTCTAATACTCATTTTGTTTTCATCTTTTTTGTTGATTCATAAGCCCACCTAATACGATGAGGTTTTGTTGTTGTTTCTTTATATATTCAAC TGGAACTTCATTTTAATACTGTAGTTGGCACTGAAATGTATCTTGCAGGTTTCTGGAATAATTGATGATCTTGACTGTGCAAAATTTGTCCTGGACTCTG CTGAAGAAGAGGCTGGAAGGGTTGTTAGAGAATTGCTTCAGCAAGGTAATTCAGCCTCAGATTCAGTGGACAATTCTGAAGTTCAAGCTCTTAAGTTTGC AGCACCAAGACTTAATATTACATCTCCAAAGGCCATCTTAATAGAGAAACGATCTATTAAGAAGTTGCTAGATAAAATTGGACCAAATGACCCGAAAAAG AAAATGATCTTGAGATATCTTTTGTACCTACTGAAAAAGCATGGAAACCTCATCTTGGAAGAACAAACGGAGAAGGCCTATTCTCCTAATGAAGAACCTA TTGCAACCGATAACTCTAGTCATGACTCTCTTCAAAGGCATCATGTTGAGTCTGAGTCTTTAGACTATGGTCAGTGTAGAACTCAAACCAGTGAGTTGGG TACAGTTACACCTCCGGAGGAATACAAATGCCCAATATCGTCAAGATTGATGTATGACCCTATTGTAATCGCTTCCGGACTGACATATGAAAGGATATGG ATACAAAAGTGGTTCGATGAGGGTAATGATATATGCCCAAAAACTAAAGAGAAATTAGCTCATATGGGATTGACTCCTAACATTATCATGAAGGAGTTAA TATCAAAGTGGTGCAGGAACAATGGCGTCTCCCTCCCCGATCCAAGTAGGCAAGCAGAAAACTTTCATTCATGGGAAACTTCCTCCACTTCCATTAAGAG TCTTGGAAGTTATTACAATGACTTGAACTTGCCAATGGATCATAGTTTCATGTCACTTGGATCCTTGGATGCAAGTTATAGTTCAGATGTCTGGCATGCT AAGATTACTCATGGCTCAAATTTGATTAAGAATAGTGACAATTCTCACAAAGATAGAGCTGATGCAGCGATACAGGATACAGATTTGATGCTTTTGTCTG AACTCCATGATCTTCAATGGGATTCTCAATGCAAGGTCATTGAAGATCTGAAAGATCATGTGAAAATCAATCACCAAGCCTTTTCTTCTGTATCACCTGA AGATTTCATTAAACCACTCGTCAAATTTCTGAACAATGCATATGATCAACATGAGGTTAAAGCACTGAGAGCTGGAACTGAGCTGCTATTGGAATTAGTG AATAACTGCAGAAATGGCCTGACTAATTTAAGCGAAGATGTGTTCAGCATGTTGACAAGTTTTCTTGATTCAGAAGTGATAGGAGAAGCTCTTGCCATAA TGGAAGAGCTATCTGGATATTGGTCTAGTAAAGCTAGAATTGCAGCATCTAGTGCACTCACTTCTATTTTAAATGTGCTTGATTCTGATGATAAAGAGTT CCAACAACGAGCTATCAGAATCATGTATAATTTGTCCTTCAATGGAGAAGTCTGTCACCACTTTTTATCTCTCAAGTGCATCCCAAAATTGCTGCCATTT TTTATAGACAGGTCCCTTTTGAGATATTGCATCTGTATATTGAAAAATCTTTGTGATACTGATGAGGGTAGGAATTCTGTTGCTGAAACAAAGGGATGCA TATCTTCAGTTACTGAAATACTTGAGACAGGTAGCAATGAAGAACAAGAACATGCACTGGTTGTTCTAGTCTCTTTATGCTCTCAACGTGTGGATTATTG TAAACTGGTTATGGATAGAGATATTATCCTTCCTCTTGCCTATATCTCCAAGAATGGAAATGATAAAGGAAAAGCAGCTGCGATGGAACTGCTACGTCTT TTGAGAGACGTCGATTATGTTGAGAATGAAGATTGCCTTGAACCAAATCTCAACACCCCTCAAGAATCCAACAATCACCCTCCTCAAGAAAAGAAAACAT CAAAAGGAACCTCATTTATGAAGAAACTATCATTGTTCTCAAAATCCAGTTCACATGCATCAAAATCCAAGAGATGAAACTGAATTCCTCAGCATTTCAA CCCATAGTATCCTTCTGATTCGTACTACGGAGACTGCAGATTATTTGCCTGATAGGAGGCATTTTGGATTTGCTAGGTAGCAGACATGCTTTTAAGATGG AGCTTAATCTTTGTGGATATAGCATTCTAAATAGTCATTTACAACACCTCTGCTGCTTAATTTTGCACTATACTACAGCAGATTGTATAAGGTTGTAAAG TTTTGCTTATGATTTGATCTATTTTTTAGATATTCCAATTCAAGGCTTGTCTCTTGTTAAGATAGTTGATAGTTTTCCCTTTTCTTCTTCCTGTCAACTT ACTAGGGACCAGTCACTTTTTATTTGGGGGTTGATTCTTATTGTATATATATTGCACACTTTCATATTTTGAGCACTGATTGTAAAATAGATACTGATTA GGGCTTTCATGATGACTAATGGCGTTTGAAAAGGTGATGAAAATTGTATTTTTAGCTCTTGCTAGACGCATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_21901; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_12166
| Blastp | U-box domain-containing protein 5 from Arabidopsis with 38.36% of identity |
|---|---|
| Blastx | U-box domain-containing protein 5 from Arabidopsis with 34.55% of identity |
| Eggnog | U-box domain-containing protein(ENOG410XRTN) |
| Kegg | Link to kegg annotations (AT4G36550) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421056.1) |
| Pfam | U-box domain (PF04564.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |