Ll_transcript_12211

• Id Trinity: FTRINITY_DN51378_c0_g1_i1
• Name Transcript: Ll_transcript_12211
• Sequence: ATCAAATCTCACAATTTGGTTTGGTGTGGAAAATTGGTATAATTTCTCCTCGTGCACTAAATCTTAGATGAGTTTGATTTTGAATGAAAGGCATATAATA GAAGACAACACGGTATTGAACTTGAACATAGCACAACCTTATTCAGCGATCGATCTCCAACAACATAAACAGCATCCTCAAATGCAAGCCTCAAATGCAA GCGCAGTTGCTGTGGCCATAAACCTTAAACCTTAAACCATAAACCAAAACCAAAACCTCACCCTTTCTATTGATACATGCCATGCCATGCCAAAGTGTTC AACTTCTCACACAACCCTTTTCGCATTCTCACTCCGAACACCTCTCAAACCATGTTCTTTTTCAACCCAAACATTTACTTCTTCACCCATAACCCTTCCT TCCAACCAACCCAATGATCCTACCCCTTCATCTCAAATCTTCAATTCGCCTACCCAAATGGCTTCTCACAAAAGGGTTTCTTTCAAAACAGGTGATTTAT CTTTCTATTCCCTCATCCAGAGTTACTCTAATTCCCTTGATTTTGGCTCATTGGATAAGGTTTTGACTCAAATGAAGTCCGAAAGGCGAGTTTTTTTGGA GAAGAATTTCATTCTTATGTTTAAAGCTTATGGGAAAGCCCATTTGCCTGATAAAGCTGTGGACTTGTTTCATAGAATGGGGGATGAGTTTCAATGCAGG CAAACTGTTAAGTCTTTGAATTCGGTTCTTAATGTGATTATTCAAGAGGGTTTGTTTAATTACGCGATGGAGTTTTATTCTGATGTTATTGCATCTAAGG GTTTGAGTATTCAACCAAATGGACTTACTTTTAACTTGATTATTAAGGCGTTGTGTAAGCTCGGTTCAGTTGATCATGCAGTTGAGGTGTTCAGGGAAAT GCCGCTTAGGAATTGTGCTCCTGATAATTATACATACTCTACACTCATGGATGGGTTGTGCAAGGAGGGTAGAATTGATGAGGCGATTTCGTTATTGGAT GAGATGCAGATTGAAGGTATTTTCCCGAACCATGTCGCGTTCAATGTGTTGATCAATGCGTTGTGCAAGAAGGGTGACTTGGGACGTGCTTCCAAGCTTG TTGATAATATGTTTCTGAAAGGTTGTGTCCCAAATGAGGTGACATATAATGCCCTTGTTCATGGGTTGTGTCTTAAAGGGAAGCTGGACAAGGCGGTGAG TCTATTGAACCGAATGGTGTTGAATAAATGTGTGCCGAATGATGTTACTTATGGAACACTCATTGATGGATTTGTTAAGAAAGGTAGAGCTGCTGATGGG GCTTCTGTGTTAATCTCTATGGAAGAGAGAGGTCATCGTGGGAATGAGTACATTTACTCTTCTCTTATTAGTGGCCTGTTCAAGGAGGGGAAGCCTGAGC ATGCAATGCAACTGTGGAAGGAAATGGTGGAGAAAGGATGTAAACCAAACACTATAGTGTATAGTACTCTTATAGATGGTCTTTGCCGGGAAGGGAAGCC AGAAGAAGCAAGGGAAATGGTATTTGAGATGAAGAATAAAGGTTACCTGCCCAATGCTTTCACTTATAGCTCCCTAATGAAGGGTTTTTTCAATACAGGT GATAGCCATAAAGCAATTCTTGTTTGGAAAGAAATGGCTGATAATAACTGTAGTCATAATGAGGTTTGTTACAGTATACTCATTAATGGATTGTGCAAGG ATGGCAAGCTTACGGAGGCCTTAATGGTGTGGAAGCAAATGCTGAGTAGAGGAATTAAACTAGATGTTGTAGCTTACAGTTCAATGATTCATGGCTTTTG TAATGCTAATTTAGTCGATCAAGGCCTGAATCTTTTCCATCAAATGCTTTATCAGGAGCCCCAATCACAACCAGACGTGATTACATATAACATACTTTTA AATGCTTTGTGCATGCAGAATAGAATCTCCCGTGCTATTGATCTTCTAAACATGATGCTAGATCAAGGTTGTGACCCTGATTTTATTACCTGCGATATTT TCTTGAAAACTTTAAGAGAAAAAGTTAACCCACCTCAAGATGGGAGGGAGTTCCTAGATGAGCTTGTAATCCGGTTAGTTAAGCGACAGAAAACAATAGG TGCTTCCAAAATTATAGAAGTGATGCTACACAAGTTTTTACTGCCAAAAGCTTCTACCTGGGCAGTAGTTCTTCAACAGCTGTGTAAACCTAAGAAAATT CGATTAGCCATTAATGAGTGTTGGAGCAGGCTATATCACTGATATGTTGTAAGATGTTATTCAATTAATATTTATTTAGGAACTCTGGATAGTGATTTTT TGATCCAGGTCTTCAAGCATAAGGCCTCAAATTTTCGACAAGCAGATACAATGATACACCTAAGATACACAGATTTTTTCATCTCTCTCAATCTCTCTAA TTCTGATGCCTTATTTTATTCTGCATCTTTTTTCCATAAGAACATAAATTTTATTGTGTCTACAATCTACATGTAGATGTTGGTATGAGTCTGAGCCAAA CAGAACAGGTGACAATGACAATAGTACTGCTTAGCAATGCAGCAGTTTAATCCTCTTACAATCTTTTTGAACTTACTAAAGTCAATTTTTGTCTGTCTAG AAAATTTACTTGTTGCAACCTACATGGTGATTAATAATATTCCTGAAAGGGCGAGAAAGTGCTACAATTATTCTGAAATGGTGAAGTGCTCAACTGTCCA ATCAACTTGATTTGTTCAAATGTGCCATCTTTAGACGATTGTATTCGTAGTACAAGACCCAGTCAAACTGGTGTACATGCAGTTTTTGAAAGAGCTATCA GTAACTTTGGCCAGTAAACAATTTTTACTATTTGCAAGTATTTTTGCAGAATGCATGTTAAGACAAGTGAGGGTGAGCTTCGGCGCAACGGTATGGCTCC TGCTTCATGACCATGAGGTTACAAGTTTAAATCCTGGAAGCAGCCTCTCCGCTTGTAGGGATAAAGTTGCATACATCTATCCTTCCCATACCCCACTAGG CGGGAGTCTCGTGTACTGGACCGCCCATTTGCATGTGGCAAGTGAAATTCAATGTGATGAACCAGTGAGCTGGGCTGCTACTATATGCCAACATACAGAA ATGCAATTTTCTTTTGTGGCCTGTTACAGAGTACATTCATTGCTTTGAGCTTAAGTTCTAAGAAAAAGAATGCAAGGCTTTTTTCTGATACAAATTATAT ATCAGAAGCAGCATATCTGCAGTTCCATTTGAGTTGTTTTCCTTGCTCTTTTCCAATTAAATTGGTTTGGGACCCGGGGCTTGTAAAAGTATTAGTTTTC CCTAGTTTACTCCTAATTGTCACAGCTGTAGATGCAGATTCAGTGGAAAAACTATGGAGCTATGATTGATGAAACCAATAGCTCAAGTGTCAGCAATTTT TGTTTAAAGCCAATTCATGTAAAAATTAAGTTTCTTAAAGTTTGTCAATTACACTGTTATCTGTTGAAACACAACCTTTTAGTTTGATGCTGCATTCTTG ATTTCTTAAAACTTTATTCATTAGCAGATTATATTTTTTAGCTTTTGCTTAGTACAATGTACTCTGTCAAAATCAG
• Tissue: flowers
• Gene name: LI_gene_21926;
• Additional information: details;

Expression of Ll_transcript_12211

FPKM

• FPAB: 1.1
• FPNAB: 1.1
• LF1: 0.7
• LF2: 0.4
• LF3: 0.5
• LF4: 0.6
• UF1: 0.6
• UF2: 0.6
• UF3: 0.6
• UF4: 0.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_12211

• Blastp: Pentatricopeptide repeat-containing protein At4g20090 from Arabidopsis with 63.18% of identity
• Blastx: Pentatricopeptide repeat-containing protein At4g20090 from Arabidopsis with 63.18% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G20090)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439321.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;