| Id Trinity | FTRINITY_DN51413_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_109160 |
| Sequence | GGCCATCTTCTATAGGTGTAGAATTAATTTATTTTGAAGTATATGACTGTTTATCCAAACAATTATTGCTCACATGAATTAGTCTTTTTAATGATCTAAC AAAACTTTATATCAATTAGACTACTATGTTAATGGTTTACATTTCATTAATTAATTAGAGTGCATCATTCGGTAGATCCAAAATAAGCTCAAATTACAAA AAAAATGAAGAGGCATTTTGGTCCTGAAAAAATGAAAATTTCCTAAAAATCTTAAATACAAGTTAAAATAATCCCTAAAGAATGTCTCTAAATTTGATCC TGAAAAAAGACAAAATAATCCGAAAAGGAGAGGGTGAAATGAGAGTTTGGAGAGCCACACAAAAAATGCAGAGAGTGATGAAGTGATAGTGTAATGATGT TTGGTTTGAGTTTTCATATGTAACAGACATGGCTTCTTCTTCTACTCTCTCTCTAACTTTCACTCTCTCCTCCACCATCACTTCGTCCTCTTCTTATCTC CCCATCTTCACTCCCACTTTACTCACCAAACATCATATTCACTTATTCTCTTCCAAACACAAACACAAACACAATCACAGTCTCAAACAACGTGTGTTCT CAGTTTCGTCTTCTTCTTCCCCTTCTCTTGAAGCTTTGATATTTGACTGCGATGGTGTCATTTTAGAATCAGAGCACTTGCATCGTCAAGCATACAACGA TGCATTCACTCACTTCAATGTTCGTGTCCCTTCTTCTTCTTCTTCTTATGATGATCAACAACCATTGAACTGGGGTATCCACTTCTACGATGAACTACAG AACCGCATTGGTGGTGGCAAACCCAAAATGCGATGGTATTTTAAGGAACATGGGTGGCCCTCTTCCAACGTATTTGAGACTCCTCCAACTGATGATGACG ATCGAGCCAAGTTGATTGACACTCTTCAGGATTGGAAGACTGAGAGATACAAAGAAATAATCAAGTCTGGAACTGTAGAACCCAGACCTGGAGTTTTGAG ACTAATGGATGAGGCCAAAGCTGCTGGGAAAAAGCTAGCTGTTTGTTCTGCAGCAACTAAAAGTTCAGTTATTCTTTGTCTGGAAAACCTTATAGGAATT GTAAGCCTAGTTGTATCGCGTATTATTACTATCAGGGATAGAAATTTTAATTTTCAATTTGCATTCAACCAACTTATTTTCGATTGTAGGAGCGCTTTCA AAGCCTTGATTGCTTCCTTGCTGGTATATTCATACCACTTTTATATATTTCTTTTAGTCATATAACATTGAGATGCAGTAATTTTTTGTACTAGTAAGTT GCTTATAAGCTATGCCATGCTTTTCCCAGGATAGTTAGTCATAACTTCAATTCACGTAAAAATGTGCTTTAAATTAAAGGGGTTCTGTGTTCATAAAATC TACTTTACTTGTTTGATTCTGTTGACCTTCTTTATCTGCCGATAAGATCTGGGCACTCAAACTCAAGTTTAGGCTCACCTATCCATTTTCTGTGAACTCA GGTGATGATGTGAAGGAAAAGAAACCTGATCCATCAATATATGTGACAGCTTCCGAGAAGCTAGGTGTTTCAGAGAAAGACTGTTTGGTAGTAGAGGATA GTGTTATCGGGTTACAGGCAGCAACAAAAGCAGGGATGTCATGTGTGGTTACCTACACGTCTTCTACAGCGGAACAGGATTTCAAAGATGCCATAGCAAT CTACCCCGACTTGAGTAACGTCAGGTATAACACATTTCTGACATCTGAAGGTACTAAGGTTGTCTTGATTTACTTATAGCTCCCGCTACTAAAATTGTGT GAACAATTCTGCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_21994; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_109160
| Blastp | Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 from Arabidopsis with 76.14% of identity |
|---|---|
| Blastx | Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 from Arabidopsis with 79.75% of identity |
| Eggnog | HAD-superfamily hydrolase subfamily IA variant 3(COG0637) |
| Kegg | Link to kegg annotations (AT4G39970) |
| CantataDB | Link to cantataDB annotations (CNT0000554) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462441.1) |
| Pfam | Haloacid dehalogenase-like hydrolase (PF13419.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |