Ll_transcript_109161

• Id Trinity: FTRINITY_DN51413_c0_g1_i8
• Name Transcript: Ll_transcript_109161
• Sequence: GGCCATCTTCTATAGGTGTAGAATTAATTTATTTTGAAGTATATGACTGTTTATCCAAACAATTATTGCTCACATGAATTAGTCTTTTTAATGATCTAAC AAAACTTTATATCAATTAGACTACTATGTTAATGGTTTACATTTCATTAATTAATTAGAGTGCATCATTCGGTAGATCCAAAATAAGCTCAAATTACAAA AAAAATGAAGAGGCATTTTGGTCCTGAAAAAATGAAAATTTCCTAAAAATCTTAAATACAAGTTAAAATAATCCCTAAAGAATGTCTCTAAATTTGATCC TGAAAAAAGACAAAATAATCCGAAAAGGAGAGGGTGAAATGAGAGTTTGGAGAGCCACACAAAAAATGCAGAGAGTGATGAAGTGATAGTGTAATGATGT TTGGTTTGAGTTTTCATATGTAACAGACATGGCTTCTTCTTCTACTCTCTCTCTAACTTTCACTCTCTCCTCCACCATCACTTCGTCCTCTTCTTATCTC CCCATCTTCACTCCCACTTTACTCACCAAACATCATATTCACTTATTCTCTTCCAAACACAAACACAAACACAATCACAGTCTCAAACAACGTGTGTTCT CAGTTTCGTCTTCTTCTTCCCCTTCTCTTGAAGCTTTGATATTTGACTGCGATGGTGTCATTTTAGAATCAGAGCACTTGCATCGTCAAGCATACAACGA TGCATTCACTCACTTCAATGTTCGTGTCCCTTCTTCTTCTTCTTCTTATGATGATCAACAACCATTGAACTGGGGTATCCACTTCTACGATGAACTACAG AACCGCATTGGTGGTGGCAAACCCAAAATGCGATGGTATTTTAAGGAACATGGGTGGCCCTCTTCCAACGTATTTGAGACTCCTCCAACTGATGATGACG ATCGAGCCAAGTTGATTGACACTCTTCAGGATTGGAAGACTGAGAGATACAAAGAAATAATCAAGTCTGGAACTGTAGAACCCAGACCTGGAGTTTTGAG ACTAATGGATGAGGCCAAAGCTGCTGGGAAAAAGCTAGCTGTTTGTTCTGCAGCAACTAAAAGTTCAGTTATTCTTTGTCTGGAAAACCTTATAGGAATT GAGCGCTTTCAAAGCCTTGATTGCTTCCTTGCTGGTGATGATGTGAAGGAAAAGAAACCTGATCCATCAATATATGTGACAGCTTCCGAGAAGCTAGGTG TTTCAGAGAAAGACTGTTTGGTAGTAGAGGATAGTGTTATCGGGTTACAGGCAGCAACAAAAGCAGGGATGTCATGTGTGGTTACCTACACGTCTTCTAC AGCGGAACAGGATTTCAAAGATGCCATAGCAATCTACCCCGACTTGAGTAACGTCAGATTAGAAGATTTGGAATTACTACTTCAAAATGTAGTAGCTGCT AAATGAGAAGCATGCTTGCATCTTGAAAATGTTTATCACAAGGTTAAGATTTTTTTAACACCGTATTATATATTCATTGATGGCATATGTATACATGTAA GATATAATGTGAAAAAGAATTCATTGCAAGATGTAATAAAGGTCACAATCTAATGTTTGTACCTTGTCATATTAAATTCCAATGCTAGATGGAAATTTCC CTTGGCAGTTCTTCA
• Tissue: flowers
• Gene name: LI_gene_21994;
• Additional information: details;

Expression of Ll_transcript_109161

FPKM

• FPAB: 10.8
• FPNAB: 17.1
• LF1: 22.1
• LF2: 13.8
• LF3: 13.2
• LF4: 13.3
• UF1: 21.2
• UF2: 17.3
• UF3: 12
• UF4: 14

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_109161

• Blastp: Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 from Arabidopsis with 78.42% of identity
• Blastx: Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 from Arabidopsis with 81.4% of identity
• Eggnog: HAD-superfamily hydrolase subfamily IA variant 3(COG0637)
• Kegg: Link to kegg annotations (AT4G39970)
• CantataDB: Link to cantataDB annotations (CNT0000554)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462441.1)
• Pfam: haloacid dehalogenase-like hydrolase (PF00702.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;