| Id Trinity | FTRINITY_DN51426_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_109634 |
| Sequence | GTCATTAGCTGCATGCGCCTTGGACTTTATTTTGATTTGACATACCACGGACTTTCCCAGGTCACCCTGCTTTGGATGAACATGGCAGAGATTCCTTGAG GCGTTTACTGTTAGCATATGCTCGGCATAACCCCTCCGTTGGTTATTGTCAGGCAATGAACTTCTTTGCTGGTTTGTTACTGCTTCTTATGCCAGAAGAA AATGCCTTTTGGACATTTGTTGGCATCATTGATGATTATTTTGAAGGCTATTATACAGAGGAAATGATAGAATCCCAGGTAGACCAGCTTGTTTTTGAGG AATTGATGCGTGAAAGGTTTCCTAAACTGGTTAATCATCTGGATTACTTGGGAGTGCAGGTGGCATGGATATCTGGACCTTGGTTCCTGTCAATATTTAT GAACATGATTCCTTGGGAAAGTGTTCTTCGTGTTTGGGATGTGGTGTTATTTGAAGGGAACCGCGTTATGCTATTTCGAACAGCACTGGCTTTAATGGAA TTATATGGTCCTGCATTAGTTACGACAAAGGATGCAGGTGATGCAATTACTCTATTGCAATCACTTGCTGGCTCAACATTTGATAGCAGCCAGCTTGTCT TTACCGCTTGCATGGGTTATCTAGCTGTGACTGAGGAAAGATTGCAAGAACTGAGAGAAAAACACCGGCCATCTGTATTAGATGTTGTAGAAGAAAGGGC AAGGAAGGGGAGAGTTTGGAAGGATTCTAAAGGACTTGCATCTAAACTTTACAGTTTCAAGCATGACCAAGCACCACTAGTAGAAGAAAGGAAACCCATT GAAGGAGGTGATATGGTTGCTGATGAGGATAAATCTCAGTTGGAGTCTCGTTCCTCTAACATAGATGAACTGCTTAATAGCCTCAATGTTGATTCAGAAT TGGATGCCCTACCGGATGTCCAGGATCAGGTCGTTTGGTTAAAGGTTGAGTTATGCAGATTGCTGGAAGAAAAAAGATCGGCCGTACTCAGAGCTGAGGA GCTAGAAACAGCTTTAGTGGAGATGGTGAAGGAAGATAATCGACTGCAATTGAGTGCAAGGGTTGAGGAATTGGAGCAAGAGGTAGCTGAGCTAAACGAA GCCCTTGCTGAAACTAAAGAACAAGAAGCTGCCATGCTGCAGGTCCTAATGCGGCTACAGCAGGATCAAAAGGTTACTGAAGAGGCTCGCAGAAGAGCAG AGCAAGAGCTTGCTGCTCAGAAATATGAAGTTCATGTGCTTCAGGAAAAGTATGATAATGCTGTGGCATCAGTCGCTGAGATGCAAAAACGGGTGGTTAT GGCAGAAAGTACGCTGGAGGCTACCCTTCAATATGAATCGGGCCAATGCAAAGCACTTTCTTCTCCAAGGGCTGCTCCCGCTAAGAAGACTGGTCTACTA AATTTTGGACTCGGTTGGCGTGATAGAAACAAGGGAAAGCAAGAGTCTGGCGAAAGTCTTTCTAACAACAGTACTCCAAGAGAAGAATCCAATAACAAAG AATAAGATAGATAGAATATGCAGAGCAGCGACGCGCGATACTCGTGAGTAATCAGGAAATATTACCTGTTTTTTATTATCTGCTCAATGTTCTTTGTTAA TTATGTCATATAGCTGGCTGAAAGTTAGAGGAAGAATCCACTTGTATCATCATTAAATTGAATGGGTAGATTACATAGTTTTTTCCCTGTCCACTGTGCT AAATTAACTTCAGGTGTAAGGAACTTTCATAGGTCAATCAGCTCTAGAATATTTTTTATTCTTTGACACAATTGTTGGCAATGTTGCACCATTCCTTAAA GCAAATCAACCGTGCCCTTACCATATTATAATGCATGCAAACATGCCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_22018; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_109634
| Blastp | Putative GTPase-activating protein AN11010 from Aspergillus with 31.02% of identity |
|---|---|
| Blastx | TBC1 domain family member 8 from Mus with 33.86% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AN7784.2) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429008.1) |
| Pfam | Rab-GTPase-TBC domain (PF00566.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |