| Id Trinity | FTRINITY_DN51499_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_109298 |
| Sequence | CTAAAATTCAGAACCCCAATTTCCCGCCCAAAGATTATACAATACAGAATCAGTAGTTCTATAATCTCAATGGACGCAACAATAGCAGTAGTAGTAAATT AGTAACTCAAGAAAAATGGTTTCATCAACAAACCCTACGAAGAACCCTAAAAACGTTTACCACATTGGAGGACTTCAAGTTGAATTTCCCTACAAACCCT ACGGTTCTCAATTTGCATTCATGGGAAGGGTTATCTCCACCCTCGATCGTGCTCTCCGGGAAGGTCATTCTCACGCGCTCCTTGAATCCCCAACCGGTAC CGGAAAATCGCTTTCACTTTTGTGTTCCTCTTTAGCTTGGCAGCAGAACTATAAATCCAAACATCAACAACATCATAAACCTGCTCCTGAGGCTGCGATT GATGCTCTTGGTTATGGTGGTGGTTTTGTTCCTCATGACGAGGTTTCTTCTGCATCAGATAATGTTGAGCAGACAGAACCTGAGGCCAACGACAAAAAGC AGAAGAAAAAGGAAGCACCAACTGTAATATATGCCTCGAGAACACACTCTCAGATTTCTCAAGTGGTTCGTGAATTGCGGAAAACTTCATACAGGGTGCC AATGACTGTATTGGCTTCACGGAAACATTACTGCACCAATAAAAATGTACTCGGCAAAGAGTCAATTGATGAAGAATGGTTGCATTTACCTCAAAAAATT TTACTTTATGAGAATTTCCTCCCGATCTTCATACTGATATATTTCATTAAATGTTCCCAGTAAACTACTTCTGAAAGACCAAAATGGCGGGTGTCCAGAA TTCAAAAATGCACATAAAGTCAAACATCATCCATCACTTCAGAAAGGAGGATGCAATGAGGTATATGACATAGAAGATCTTGTAAAAGTAGGACTAGGGG TGAAAGGCTGCTCTTATTATGCTGCTCGTAATATGGCAGATGATGCACAGTTGATATTTTGTCCATATAGCTACATCATAAATCCAGTCATTCGGGGAGC AATGGATATAGATATTAAAGGAGCCATTGTGATTCTTGATGAAGCTCACAATATAGAAGACATTACACGTGATGCTGGCAGTGTGGATATTGAAGATGAT GTTTTGGATAAATTACAAATGGAGCTCCAATACCTCTGTTCTGAAAATGTTGCAATTTACCAACCACTGTATGAGATGATACAGGGACTTACTAGTTGGA TAGAGAGGAATAAAAATAAACTAGAAAAGCGTGATTTTCAACACTATGTGTCATGTTGGACAGGTGATAAGGCTTTAAGAGAGCTTGAAGAAGCAAATAT TTCAAAACAATGCTTCCCTATCTTGCTAGAATGTGCTACTAAGGCAATCAGAATTGCTACAGATTTGGAGGTGAAAGTACCACATTTAAGTGGCCTGTCA GTTATAACATTGGAAGGTTTATTCTCATCACTAACTTATTTCTTCTCAAGAAATGGTGCCCACATGTTTGATTACCAGCTTGCTCTGCAGCAATGTGTTA GAAAAGATACCGGAAGAGTTGTTGGAAACTGGATGTACACTTTTAGTTTGTGGTGCTTGAATCCAGCAGTTGTGTTTAGAGATGTTGCTGATCTTTCTTT ATCAGTCATTTTGACTTCTGGGACGCTCTCACCAATGGCTTCCTTTTCTTCTGAGCTTGGAGTTCAGTTTGAAACTAGTCTTGAAGCTCCACATGTCATT GATGTTGACTCACAGGCATGGCCTGCTGTAATCTCAACTGGTCCTGGCAATTATCCTTTGAATGCAAGTTATAAAACAGCAGATGTATATGCATTCCAGG ATGCAGTTGGAAGATCTTTGGAGGAAATATTCAAGATTGTTCCAGGCGGATGTCTTGTATTCTTTCCAAGTTATAAATTGATGGAAAAATTATGTAGGCG TTGGTCTGAAACAGGTCAATGGTCCCGACTTCATGCTGAAAAGTCTGTTTTTGTTGAACCAAGAGGAGGAAACCAAGATGACTTTGAACTTGCATTAAAG GGGTATTATGACTCAATTCATCGTGGCAAACCACCTGCTTCTGGAAGGAAAAGAAGGATCAAGAAAGTTGATATAAGTCACTTCTATGCAGCTGATTCCC AAGAGAATTCTAAGAAAGGAGGAGCTGCTTTACTTGGTGTTTGTCGAGGAAAGGTTTCTGAAGGAATTGATTTCTCTGATGATAATGCCAGAGTAGTTAT TATTGTTGGTATTCCATTTCCTAATATAAATGACATTCAGATTGCACTAAAGAAGAAATATAATGATACATACAAATCATCCAAAAATCTTCTGAGCGGA AGTGAATGGTACTGCCACCAAACATTCCGTGCTTTAAATCAAGCAGCAGGGCGTTGTATACGGCACAAACTTGATTATGGAGCAATCATCCTATTGGATG AACGTTTTCGGGAAGAAAGAAATCGAGCATTCATTTCGAAGTGGCTACGAAGAACCTTGAGGGTGTATGACAACTTTGACGAATCATTAGAGGGACTAAA GTCATTCTTTAAGGATGCCAAGGAACGGTATGGCATGACACAGAATTTGGGGTCTGATAGTGATCAAAACATGGATCAGAATAAGTGGGTCACAGTAAAG AAAAATACAAAACCTAAAAAGTCAGGGAATGGAGAGAAAGAAACATCAATGGTTGAGGATAATGGCTCTTTTCCCACACTAAACTGTCAAGATCTTGCTG AGAGTAAGCCATCACCTCAAAGGAATAGAAACAAATACGATTTTAAAGACCATATCAACCTCCAATGCTCTAATCAAATAGAGCCAAGGTTCACTGATGA ATTATCCGTGGCTATGACAACAGAAGAAATCTCCATTGTCAAAGAAACCCCTTGTATAGATGTATGCCTTTATTCTGGTAGTCCTGGTAGTAAGGATGAC AACTCTGGTTCCACCGTAATTGAGCCCTCTGCCCATTTTCCAGATTATTTACCATGCCATTCAATCTCTTTAACTTGTGGACAGAAAAGTTCAAGGGATC AATCTTTAATAACAGTTACTCCAGAGAAGAGTGTGGTTGCAAATAATATTCCAGAAACGGAATCATCTTTTGATTTAAGTGTTAATTCTCATAACCAGAA AAGGAGAAAGCCCATTCTCACACCATTTGTAAACCTCATTGATGACGAACAATATATTGCTCCTTGTGCCAGCACTCTTACAAGGCATTCTAAAAGTTCA GCAAATATTAGACAGGTGACTCATGGAACTGAAAATGGATTTGAGAGAAATTTTGAGTCAAATTCTCCTCATTTATTGACTACCAGCCTAGCTGGTGCAT GTTCATCACCTGCCCCTCTAATGAACAAAAGGTTACAGATATTTTGTTCACACTGCAAAAATCCATTGGGCCGACCTGAAAACAGTCTATATCTTACATG CTCTTTGGTTTCATCATCAAAAGTTCACTTAAGATCCCTTTTGCAACAGAATCTGGAAACTATTCATGCAGATACATTACGAAGTGTATCAATTATTATT ACTGACTCTTCATGTGTTGATCAACGGATTTGCAACAGAATACCTAAAAGTGCACCAGAACAGGGTATTTGGTGTCGTGAAGATGGGTGTGTCTTCAGCA CTATTTTCTGTCCCTTCTGCACTAATGCCGACAAGTTGTTAGGAGTTCAGGTCATGGCAACAAATTCATCAAATACTCAGTTACTTGACAAGGTATTGTT TTTCTTTGATTGTTTGGAAGTGAAGAACCATGAGGAATCAAGGAAAGGTGCTTCTGAGAAAGTGGATTTGTTGCTGGTTAATGACTCCGACAATGGTGGT ATTGTTTTCTCCAATTCCATTAACAAATATGCTTATCATCCCCAACCTGAGAAATCAGAAGTCTGGAAGAGTAGAAAACGCCAAAGTTGATGAGCATAGT GCTGCTTGACATTTTCTTTGTAAATGATACAGCAGAGGCTAAGTGGATCGACTTGCACAAAATGCCAAAGTTGAAGCTAATAAAACTGCAGTTATAGTGC AGTTTTGGTAACCATGTAGTGAACACAAACAGAGGTAGGGCCAGTAGATTGCAAAAGTTGGGGAATACCAAATATTCTGGACCTTTCATTCATCTGCAAT TAGTTGATCCATGACATCGAGTTAGTATTAAGGGGAGCACATCTGACAGTTGTTCATTGAGCCAAATTATCCATCTAACCACATCGTAATTTGACATTTT AAAATTTTGTAACATCTATCAAGTATGAAGATGCAGAGCTCATTATGGTATTTGGATATTTTGGGGTCAATTTGTAAAACAAATTTCTTGACCTTCAAGA TTTGGCACCACTTCTCATCGACATCAAGTATCAACCTGTTTTGGTGGCTCAAAAGGATGTTAAAGTTACTGCATTGTAGTTTTTGTACAGCAATGCATTT GTTTGGAACACATTCAATAGTTAGTTATGCAACCTGGCTCATTATGATGTAGCTTTCTTGTACAGTAAGTTCAACAAGTGTTTTCATTCATGTACTTTGG ATATGTTCAAAAATGGTTGACAATTTGCCAGGCTAATTTATTAGTGTGATATAACATGTCTCTTGTTATAGGGGCAGTTGTTGAAAGAAGAGATGGATGG TGCTATTAAATGAGTATTTTAAATTCATTTGTCAATAAATGGTAGATGATATGAATGTGGGTTTCTCATGTGTTCAAATCAATGCATAAGTAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_22182; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_109298
| Blastp | Fanconi anemia group J protein homolog from Gallus with 40.58% of identity |
|---|---|
| Blastx | Fanconi anemia group J protein homolog from Mus with 39.58% of identity |
| Eggnog | helicase(COG1199) |
| Kegg | Link to kegg annotations (417642) |
| CantataDB | Link to cantataDB annotations (CNT0001694) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449505.1) |
| Pfam | DEAD_2 (PF06733.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |