Id Trinity | FTRINITY_DN51516_c0_g1_i3 |
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Name Transcript | Ll_transcript_27191 |
Sequence | CAAATATGAAAATTTTGGTTTAAAAAATTAGAATATCATTAATACACAATAGGTATCTAATTTGCAGGTTACAAATCGAAAATTACCATCAGATTCAACA TGAGTAGAATAAAGATAGAATCTATTGATATCAATCATTCCCAAGAACGGGTAGCCTCTCTTCACGTGCATACAATTTGAGAGTTGTGTCAATCACCTCC TTTACAAGATCTGTCTCATTCACCACAAACCGAATTGGATCGACGCTTCCTAGCACATTGATGATGATCAAAAACCTATTCGAATTCACGTTGTGGCTCT TCTTATGCTTCCTAAATCCCATTTTTGTTCGTGCCTCACATTGATCAAAACACAAGAACTGGAAGCGAAGGATGACAGAGTTTTCTGAATCTGGTCCATT TACATATTCAACCCATTGTTTCAGCAACAACAGAAAAAAAAGAAACAATTATGTAACTGTTCCACTAGTCATGACCTTTATGATGGATGAATGTCTCTTA ATAAGAAAAAGAAATAGTTATGTAACTGTCCCACTAATGATGACATTTATGATAGATAAAGGTCTCTTAATAAGAATAGGTTGCTCTTTGTATTACGTCA CTATTCCTACTCCTCTATTCAGAAACATAAGCACTATCGCTTGAGTGAGTAAAGGTTTAGAAAACCAAATCAGAAATGTTCATTGTAATCACAATGTGTT GGTTACAATTCAAAGTGTTCAAGAAAGCTAAGGAAGAAAAAACAAGGAGACTCAAATAGCAATAACTTTGTTCAACCTGCGAATATTTTTTATACTAAGT GTGATGTTCCTGAGTTGAGAGGTGACAACTATAAGGTTTAGAGGGAGATAATTCTTTTTCATTTGGGCGGGATGGACATCGACTATGCCATAAGGAAAGA TGAACCAATGGCTATTACTGAAACTAGCCTTCTAGACGTTGTTGACCTTTATAAAAAATGGGAGAGATCTAACTGTCTCTCCGTGATGTTCATAAACACA AAAATTTCTAATAGCATTCGTGGGTCTGTCGATAGGCATACTAAAGTTAAAGATCTCATGAAAGCCATTGATGCACATTTTGTCACATCTGATAAGGCGC TTGCTAGTACCTTAATTATGCAATTCTCATCCATAAGGCTCACGGGGGTAAAAGGTGTGCGTGATCACATCATGCGTATGAGGGATCTAGCGGCTCAGTT GACAACCTTAGAGGTTACCATGTCAGACTCTTTCCTGATTCACTACATTTTGTGCTCTCTGCCTCACCAATATGCACATTTTAAGATATCTTATAACACA CATAAGGATAAGTGGTCAATCAATGAATTATTGACTATGTATGTTCAAGAGGAGGGAAAATTGGTGATGGAAGAGGGAGAGAGAGTGAACTTGACCTTTG ATGGAAAGAAGAAGAAGGATTATGCCAAAATCAAGGGCAATAATGCTCCTAAGCCAGTCATAAAGAAGGAGTCGAAGTATTGCTTCTGCAAGAAACCAGG ACACATGAAGAAAGATTGCACTAAGTTTAAGAATTAGCTCGACAAGAAAGGGTATGAAAAACCTAAGGAAGTTGGTGGAAAATGAATAATACATCTATTC AAGCGGGAAGTTGAGTTGACATGTGGAGTCTATTGGGACATGTAGTTTGGTTTTAAACAACAACTTTGTTTTACGTTTAGAAAAGACCTTGTATGTACCT AGTTTTTCTAGGAATTTAATTTCAGTTTTAAGACTTGCACCTTTGGGATTTACTTTTAATTTCTTAGGTTCTATTTTTTCATTATCAAATAAAATGGGCA TTGTTGGTTTTG BLAST |
Tissue | flowers |
Gene name | LI_gene_22219; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_27191
Blastp | - |
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Blastx | - |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0001497) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_014623155.1) |
Pfam | gag-polypeptide of LTR copia-type (PF14223.5) |
Rfam | - |
GO | - |