Ll_transcript_27350

• Id Trinity: FTRINITY_DN51555_c1_g2_i7
• Name Transcript: Ll_transcript_27350
• Sequence: GAATACATTTTTGCCCAAAAAAAAATACAAACCAACATTAAACAACATAAGAATAATTCTTGAATCATAAAAACACCTTAAGATTATGATTGCTCCAAAC ACATGTACTGAATTGTGGCACAAAGTTGAACTGGGCCAATGTCACATGATTAGAGGCCCATATGAAACCGAGCCTACTCAGCCGAACGGCGCGTGTAGGA CACGTTCCTTTGATATTGATCATCAGTTCATAACAAAGCACCAATAAACGTTGATGACTTAAGAAACTGATTAAATTGTTGTGCATAAAATACAATTTCT TTTGGAATTGATGAAAAGTGACATAACCCAATTGAATAACGATGGAAAAGAAGGAACCTTTGCTTCAATTCGCACTGTTTCAGAGCTCAGTGGATGAAGG CTTCTGGCACAGATTGTCTTCTTTGAAGCTCAACAAGCTTGGCATCGATGATTCCCCAATACCCTTAATTGGTTTCTATGCACCTTGCTCACATTCTCAA GTATCAAATCATTTAACTCTTTTAGCTGAGTCTTTGCCTTCTGAGTTGAGTGAGGCATCATTAACACCAGAAACAAGCCATGGCAACCGGAACAGGTGCT CTGTTCCAGGGATACTTTACAACACTAATACCGTGGAAAGCTTCCATGCACTTGATAAGCAGAAGCTATTGAAGGAAGTAGCTGGAAAGATATGGGATGA CATTCTGACCGGAAAAGCTGTGGAGGACTGTTCAGTACTTTCAAGATTCCTTGTTATTTCCTTTGCTGACCTGAAAAGGTGGAGTTTCCACTACTGGTTT TGTTTCCCTGCTGTGATGCTTGATCCTCCCGCAACTGTGGTTAATCTAAGGCCCGCTTCTCAATTGTTGAGCACGGCCGAGGCTGAATCTCTCTCTGCAG CATGCAACAAGTGGCGTAGCTCAAAATCAACAACAGATGTGCCATTCTTTGTAGTCATGATAGATCCAAACTCATGTGCTACTGTTAAGCTTCTAAAGGA CTGGGAAGCTTATCAGAATGATGCTCACAAGATTCTCTTTGGATTTTATGATCCGTGTCATCTTGCAAATAATCCTGGGTGGCCTCTACGCAACTTCTTA GCACTAATTACTGCGAGGTGGAATCTAAAGTCCGTTCAATTTTTTTGCTACAGAGAGAACCGTGGTTTTGCAGATATGGATTTGTCCCTCGTTGGTGAAG CATCGGTAACTGTTCCTCAAGGTAGAGGTGCATTAATTTTGTAACAAGTTATATTGGTGACATATCTTCTGTTCTCAAAACTGTTTTACTGTGTCGTGTT TATATATTTTAACTTCAAAGCAGTACCTGTATAGGGTGGAAAGATGCTGTGCCTAATGCAGTTGGGTGGGAACTTAACAAGGGGAGAAAAGTACCGAGGT GTATTGGTCTTGCTCAATCCATGGATCCAACCAGGTTTATTGCCTGATTTACTTTCCCTAGGTCTTCTTTTTTTAATGCCAACAAGAGAATAAACTCAAT ATAACAGAGATAAGAATGTTGGGTTGGATAAGTGGACATACTAGACATGATAGGATTAGGAATAAATGCATTAGAGATAAAGTTGGGTAGCTCCTAGTGT AGAAAATATGGTTGAATCTCGCCTTAGGTTATATCAGATGGAGGTTAGTCCAATTCATAGAGGCAGGTGGAGGCAAAAAATAGGTGAAACTATTAATAAG GATTTGGGAATCAACGGTTTGTCAATAGACATGATTCATGATATAACATTATGGTGTCGCTTGGTCCATGTAGCCAACCTCGCCTAGTGGTATTACAGCT TGGTTTTTGTTGTCGCTGCTACTAACTTTCTCAACATTTTCTTTTGCATTGCCATTTTTTTTATTGTTACAGGTTGGCCATATCTGCTGCTGATTTGAAT TTAAAGCTTATGAGGTGGCGTGCTTTGCCTTCTCTAGACTTAAGTGCCTTATCTTCTGTCAAGTGTCTTCTCCTTGGAGCAGGCACACTTGGATGTCAGG TTGCGCGTATGCTTTTGGTGAGTAGTGAGAAAGACCTATTTTTATTATTTCAATTCGTCTCTTGGTGATAAGGCTTGTGCTATTGCAGGCATGGGGTATC CGAAAAATTAGTCTAGTTGACAATGGCAGGGTCGCTATGTCTAACCCATTGAGACAGTCCCTTTATACTTTCGATGACTGTCTTAATGGTGGTGCTTATA AAGCTACAGCAGCAGTTGAAAGTCTCAAGCGAATTTTTCCAGCAGTGGAAGCAGAAGGCATTGTGATGGCTATACCAATGCCTGGACATCCAGTAAATAG CCATGAACATGATAGTGTACTAGAAGATTGTAAACGCTTGCATGGTTTGATTGATGCTCATGATGCAGTTTTCTTACTGACAGATACAAGAGAAAGTCGA TGGCTCCCAACCCTTCTCTGTGCCAACACTAACAAGATTACCATTACTTCAGCACTTGGATTTGATAGTTTCTTGGTTATGCGCCATGGAGCTGGGCCTT TCAGCCATGCTTCTTCTGACTTCAATGCTGAAACTGCTAATTCTTCATCTGCTGATATGCCCAAATGTTGTGAAAATGATGCAAATGAAAAGCATAGATT GGGCTGTTATTTCTGCAGTGATGTTGTTGCACCAACTGATGTAATTTCCTTGCAGCCGTATGAGTGATATTTGAACTTATGAAATACTATATAGAACTTA TTTGTACTGGCTTTCTGCAGTCAACATCTAACCGCACTTTGGACCAGCAATGCACCGTAACTCGACCAGGGCTAGCTCCTATCGCTTCAGCCCTTGCAGT TGAACTTTTAATAGGAATTTTGCATCACCCTCAAGGGTAATCAGAAAAATCTTATTATATCCGCAAGGATTTTGAGGAGCTATAGTAGAGAGCTAAAAAG GTCCACTTGCTTTGCTTTATTTTTCCAGCATTGAATTCACATCATGAGAATGCTTTTTCAGGATATTCGCAGAAGGTGATATTAACTCGAGTATCGGTGG AGCTGCTGAGCAACCTCTTGGAATATTACCTCATCAGATCCGTGGTTCCCTTTCTCAGTTTTCTCAAATGACCCTTTTAGGCCACTCCTCCTCCAACTGT ACAGCCTGTTGCCATACTGTAAGTTTGTCAGTTTTCATTTCCGTTAGCCCATTGCCGCCGGCAATGCTCTTGAATGTTGTGAGTATAACATCTGAGCCAT ACGCTTGATTTGATAGCATTGTTTTGTAAAATGCAACCATACAGGTTGTATCGGAATATCGAAGCAGAGGAATGCAGTTCATACTTGAAGCAATCAATCA CCCCACATACCTAGAAGATCTCACTGGACTAACAGAGTTGATGAAATCAGCTTCCTCATTCTCATTGGATTGGGATAAGGACATAGATGATGATAATGAT GAAGGCTTTGTTGAAATTTAACAATTTGCCAGTTCTACATAAACTAACTTGTGTAATTTGTCATTTTTTCTAACTCATGTTATTAGTTGCTTTTATCAAA ATAACAACAACTTATAAAGTTGGTATTGAATTTGTAAACCACACGCATTCTGTATTGTTAAGCAAGAGTGTTTATCCTGTATCCTCCACTATACTAAGTA CATTCTCTAAGAATAATTCAAAAATGATGTTGCGTACTACCCAAGCATGCAGAAGGAGAGGCATTTCATGTGACCATTTACGTGTTGGTCATATGAAATG GAAAGTGTGCGCGTTTATAACAAGAATATTAGTGAAGGAAAACAACAACCGCGTTTATAATTCATAGGATTGTCTCCTCC
• Tissue: flowers
• Gene name: LI_gene_22291;
• Additional information: details;

Expression of Ll_transcript_27350

FPKM

• FPAB: 0.4
• FPNAB: 0.3
• LF1: 0.1
• LF2: 0.1
• LF3: 0.2
• LF4: 0
• UF1: 0
• UF2: 0.3
• UF3: 0.1
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_27350

• Blastp: Ubiquitin-like modifier-activating enzyme atg7 from Arabidopsis with 68.12% of identity
• Blastx: Ubiquitin-like modifier-activating enzyme atg7 from Arabidopsis with 64.17% of identity
• Eggnog: small protein activating enzyme activity(COG0476)
• Kegg: Link to kegg annotations (AT5G45900)
• CantataDB: Link to cantataDB annotations (CNT0001307)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019412946.1)
• Pfam: Ubiquitin-like modifier-activating enzyme ATG7 N-terminus (PF16420.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;