| Id Trinity | FTRINITY_DN51561_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_27007 |
| Sequence | CAAAACCCTCATTTCTCAAATACAATCATTATAATCTTTTCTCTCCAACGAAACCCTCACCGCTTTTCACTTCTCCAACTACATTGCAACGACGTCGTAA TGTTCACGCCTCAAAGGAAGGTAACGCCCACGGCGGCGTCATTCACGCCCCACCGTGGCACCACCTCCAATCTCCCGTCCTCCGTTTCGAAGGGTAAGTC CGTCCTTTTTGCAGAGGAACCACCGTTTCCTCCGCCGTTGGCTTCGATTAGCGAAACCACGACAGAGGTTGCCGTAGGGTTCGATGCAGGGAACATCGAT GATTGGAGGAAATTTAAGGAGGCTGGGTTGCTCGATGAAGCAGTTATGCAGAGAAAAGACCATGAAGCGGTATTAGATAAGGTTTCGAGGCTCGAAAAAG AGCTTTTTGACTATCAGTACAACATGGGCCTCCTGTTGATTGAGAAGAATGAATGGAGTTTGAAGTTTGATCAACTAAGGCAACAACTAGCCGAAACAGA AGCAATTCTTAAACGAGAACAGTCAACACACTTAATTGCATTGTCTGAAGTTCAGAAGCGAGAGGAGAATTTGAGGAAAGCATTGAGCACTGAGAAGCAG TGTGGGGCTGATCTTGAGAGAGCTTTGCGTGCAATGCAAGAAGAGCATGCTCAAATCCTGTCTTCCTCCAAGACAAAGTTAGCTGAAGCAGATGCATTAG TTGATGGGATTGAAGAGAAGTCGTCTGTGGTAAATAACAAACTGCATGATGCTGAAGCTAAGCTTGCTGAGGTAAACATAAGAAATGCTGAGCTGGATAT GAAATTGCGAGAGCTGGAGGTTCGTGAAAGCTTGCTTCAGAAGGAACGTTCATCAGTAGCTACTGACCGGGAATCATTTGAGGCAACATTCTATAAACAA AGGGAAGATTTGAAGGAATGGGAGAGGAAGCTACGTCAAAGAGAAGATATGCTTTCTGATGGTAGGCAGAATATTGGTGAGAGAGAGGAGAATGCCATTG AAACTGAGAAGAACTTGAAGCAGAAAGAGAGAGACCTGGAAGTGTTGGAAAAGAATATTAATTCATCTAATTCTGTATTGCATGAAAAGGAAGCTGAGAT AAGTAGAAGATTAGTAGATCTAGATATGGAAGAGAAGAAAGTGGATTCTTTGAAGAGCATGCTGGAGATGAAAGAGAAAGAATTACTTGAAACTGAACTA AAGCTTAGTGCTAGAGAAAGAGAGGGGATCCAGAAGGTCCTTGCTGAGCAAAAAGATATGCTGGATTTAAAGTTGCAGCAGTTTGAGCTGGAAATGGAAC AAAAGCGGAAATCCCTTGTTGAGGAGTTCAGAAGCAAGGAAGAAGCCTTGGAGCAGAGGGAAGTTGAAGTCAACCATAGAGAAACGAAGATTGGAAAAGA AGATCAGGTTTTGAGTAAGAAGGCTGAGAGAATAAAGGAGCAAAATAAGGAACTTGAAGTGAAGTTAAAATCTTTGAAGGAGAAGGAGAAGACTATGAAA ATCAAAGAGAAAGAATTGGAGAAGGAAAAACAACAGTTGCTTGCTGATATGGAGAGTCTGGGAAATTTAAAAGTTGAACTTGAAAAGACAAAAGCTGAAA TTTCTCAGCAAGAACTGCAAATATGCCAAGAGAGTGAGAGTTTGAAGCTTACAGAAGATGAGAGGTCAGAGCATTCTCGTTTGCAGTTGGAACTAAAACA GGAGATAGAGCATACAAGATTGCAGAAGGGTTTGCTTTTGACAGAAACTGAGAGCTTAAGGAAGGATAGAGAGAGGTTTGAGAAAGAGTGGGAAGTGTTG GATGATAAAAAAGCTAAAATCAGTAAAGAGCAGCATGAGATTGATGTGGAGAAAGAAAGGTTAAGAAAACTGCAGCATACTGAAGAGGAGAAGCTAAAAA GAGAGAAACAAGATATGATAGATCATATAAAGAAAGAGATGGAGAAACTTGAATTGGAGAAGGAATCATTTAGAGAGTCAATGGAGCAAGAGAAGCTTCT TTTATCTGAAAAGGTGAAAAATGAAAAGGCTCAAATTCTCAATGATTTTGAATGGAAGACAAGGAATCTGGAGAATGAAATGCAGAAAAGGCAGGAGCAG ATGGAGAAAGACCTGAAGGAAAGAGAGAGAAAATTTGAGGAGGAAATGGAAAGAGAGCTTAATAATATTAATGCCATGAAGGATTCTACTGAGAAAGAAT GGGAAGAGGTGAAGTCTGTAGGACTTAGGTTAGAGAATGAGAGGAAGGAACTCGAGTCAAACAAGCAGCAGCTTAAGTCAGGCCAGCATGAGATGCACAA AGATTCTGAAATGCTTATTAATCTCAGCATGAAGGTTAAGAAGGAACGTGAACGCCTTGTGTCTGAAAGAAATCACTTTCTTGCACTTGTTGAGAAGCTA AGGAATTGCAGGGGCTGTGGAGAAGTTGTTAGGGACTTCGTTGTATCTGATGTTCAATTACCTGAGTGTAAAGAAAGAAAGGTTATTCCATTATCTACCT CCCCTGTTCTGAATGATGGGATTCTTAAGAACTCTGAAGACAACTTAGCTGCTTCTGACTCAAACTATTCAGGATCTGCGAGGCCTGTGTCTTGGCTCCG TAAATGCACATCAAAGATTTTTAATATATCTCCTATTAAAAGAACAGATGCTGTTAGTGCATCAGACACGGTTGGGTCATCACCACTGTCAGATGTGCAT GTTAATACAAAACATGTAGAAAACATTGCATCTATTCCTAATGTAGTAGGAGCTAAAGGTGTTCTTGAAGAACAACAACCATCAGGTGTAATAGCAGCTC ATCACTCTTCACAACACCAATTTGATAACATTGTTAGAGAGGTCGGTGATGAACACTCTCAACCTGTAGATAATCACAGCTACATGGATAGTTTTGTAGA TGGAGCTCCAGTTGATTCTCAACAGTCAGCTCCAAAGAGTCATCAACGTAGAGCTGGAAGGAAGAGCAAATCTGGAATTTCTCGAACACGCTCAGTGAAG GCTGTAGTCAAAGAGGCTGAGGAGTTCCTGGGAAAAGCCGCAGAGAAAACAGAAGATGCTAGTTTGCAGTCTCTCAATACTGATCGTGTCAAAGAAGAGA GTCGAGAAGACTCCAGTGCCCGTAACACTGGAAGGAAGCGGCTACGAGAACAAAGTACCAGGGTTACAGAAAGTGAGCAGAATGTTGGTGATAGTGAAGT ACAGTCAGATAGTGTTACAACTGGTGGTCGCAGGAAGAAGAGGCAAACAGCTGTTGCACCTATGCCAGTTTTAACTCAGAAACGATACAATCTCAGGGGG CATAAGACGTAAGTTTCGTGTTTGTGCATCCTCTGGGGAAATAACACTTTACATTATAGTGTATGTTGTGTCTATTTATCAGGGATAAGTTTCTTGGATG TGAATTGAATACAATTGAGTATTGTTTTTATAATTAAATTAAACTGATTAAAAAGAAATGACATGTTCAAAATAAATTTATTATTGTTGACTTCCACATT GATGGTTTCATTTTTTATTTTCCCCTCCCCTTGCCTCTTGCCCAAAAAGGAATAAAAGAAAAATC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_22307; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_27007
| Blastp | Protein CROWDED NUCLEI 2 from Arabidopsis with 40.43% of identity |
|---|---|
| Blastx | Protein CROWDED NUCLEI 2 from Arabidopsis with 40.22% of identity |
| Eggnog | Nuclear matrix constituent protein(ENOG4111KVI) |
| Kegg | Link to kegg annotations (AT1G13220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429424.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |