Ll_transcript_27458

Id TrinityFTRINITY_DN51566_c0_g1_i1
Name TranscriptLl_transcript_27458
SequenceCAGAAATTATAAGGACGAAGACCTAAATTGATAAAATAAAATTAGCCGAACTATTTTTGAAGTAGTGCTAGTAGCCTCTCCAATGGCGGAACACAACGAA GCCACGAATGACATAACCGAACCCGAGTTGACACATGTTGCTGAAAACCCCGCCATCAACGAAAACGACGCTCCATGCGACTTAAACGGCGTGCTACAAT CTCTGCCTTCCAACGTCATCAATGACTTGTTATCCTTCGGGATATGTGTCCGATGCATTTTTCGGGTATTTGGTGTCAGAGGACGCATCTATGCCTCACC AGATTTGGCAGTGAACAATCTGAAGGATAATTTGAAGAGCTCTGAAAACTCAAATACTGCAAAGGAAACTAAGCTTTGCAGGCTTTGCTTAGGGATACTG CAGTTTAGATTTGTTGATGAGAAGGAAGTGGTGGTGAAAAAAGATAGTGTTGATGATATGGCTGTACTAATTGCTGAAATGGTAAAGAAGGAGGGTTATC AGATTGATGGTTTTTCCTTTGAAGTTTCTGTCCCACCTGTTCTACTTGAAAATGATAACTCGTTTTGGTCATATATGAAATCAAAATTTGGATCTGAACC TTGGTTCCAAGAAAAGTTACATACTGAACGTATCTCTACAAAGGATGCATTAAAATTTTCACTAGTATCTCCTCTTGAAAATCTTCTGGTAAGTAATATT TCTTTCCCACATGTTTCATACATTGTCTCTTGGAAGATTTGTTTTTTGACACAACAACATCATTGTTTGATCCATGTAGTTGAAACCATTTATGGGGTAA AAGGCTTTGGTTGTTATTGTTCTACATGTTTCATCAAGTGAAATGGCAGGCTTAGATTTTGCTTGCTATTTCACTAACAATATCTTTAGCAATGGTACTA GTCACAAGCCTGTGGCTCATCAGAATAAAATTACTGGAACTTGAATATACCTCTTCTCGTTATAAGCCAAGACTTTAAATCTATTTGTTTTCTTATAACC CTTCACAGAAATCAAGTTTTGCAGGACTGTAAATCAAATATGAGTTCTTTCCGCATTCGTTTAACATACAATCACACTAAAGGATTGAATGGGACTGAGA AATGTTCAGACAACGATGAGCGTTCCAAGAGAAGAAAAACAGGTGAATCCAATTTAGTTGGAGAAAAGCCTTTTAGCAGTTCGGTAGAAAATGAATCCTC TGACTGGTGTGAATCCTTGCAAGAAATGGCAAATGAACCCTGTCATTTTACCTGCGTTTTCTGCAGAGAACCTTACTATTTTGGTGGAAGATACCTTAAG TATTCACGAAATGTGAGTCAGACACGCTGGATCATTGATGATGAGAGAATGGGTGAAGCATCAGTTGAGGAAATAATTGGCGGAAACATCCTCCAGGCAT CCCGTGGTGATAGTTTTAAGTTTCACGCTGCCGGCAGAGAAGATATCGATGTACGTATGCTGGGCCCAGGCAGGCCTTTCCTTGTTGAGGTGCAAAACGC ACGACTTCTCCCGTCTGAACTGTTCGCCAAAGATATAGAGAAATTGATAAATAACGTGGAAAATAAATTGGTTAGGGTGAGAAATCTGAATCTCGTTGGT AGTCATGGCTGGAACCTTATGCGTGAAGGTGAAGCAGAGAAGCAGAAGCAATATGCTGCTCTAGTGTGGATTTCTCGCCCTTTGAAGGATGAAGATTTGC AACATATTTCTTCACTCAAGGATTTGAAAGTTTTGCAGAGAACCCCTATAAGGGTGCTACACCGTCGCAGTCCTTTGGAGCGTGAAAAGATTATCCACTG GATGAAAGTGGAGACAATTGCTGGAAGTTCGCAATATTTTCTTTTGCATCTATGTACACAGGCTGGGACCTACATCAAGGAATTTGTTCATGGGGATCTT GGTCGAACCCAACCTAGCATTGGATCAATTTTGGACTGTAGAGCTGAAATTTTGCAACTTGATGTTACAGACATCAAAATGGACTGTTTCCTGGCCTAGT AAGGTTATCTCCTGTTTTCAGTATTTAGTTGATTGATTTTGGAATGAGCAGTGCTCAGATGAAAGACACTTGAGTATCTTCAACTTGAGCTTTGTTTATT TAGTATCTAAAAGATGTTCTCAGAATTAGTAACTTGAGCCTCTTATTAAGGTCTCTATGCACACTTGAGGAGTCCTGAAGAAGAACAAAAGCAGTCATAA CTTTAATTTTATTATAGTGATTGAGAATAGATTTTGATAGTGAAGCCTCAAGAATGGTTCTTAAGTTTTTCATGTCTCAAATGCAGACTTGCTTTTAAAT GGTTAAGCCCTGTAGAGAACCTGCTGGAGTAAATTGATGCCTTTTAAACAGAAAATTGTTCACCCAAAAAATATAACAGTTCAAACACCAAAGGCTATAC CCCCTTGAGATCGGGGTTAGTTAAAGGAACATGTGTGAAACCTTCAACTTAATTAATCAATTAAGTTGAAGGTTAAGGTTTCTAAGTCTCCTACTTGCAG AGGAGAAAATGAGGGTGGGGACAAATGGATATATAGACAAGAGGAAATTCAATAAACATGAAGTTGATAAATTTACATATATTGATATTAATATTATTGC AATCTTACAGTGCTCTTTATATACAGGATAAAAACATAATGATGCAAGTTTATAACATTATTTCTAGCACCATGTTAATCAAAATGAATAAATAACTATT GTATAAATTTAAAAAAATTACAATAGGATCACACAATGAGTGATGACATATTATATTCATAACGAGATCTGTTAAAAGAAAAAAAAAAGGAACATATTAG TAGCCGTTTTCTTCATTTATTGTGATTGTATACCAATTTTTTATATTTATCATGTATAATGTAAATATTTTCAGTATGAGAATATATTACTTAGCAATCA TATATATTTTTTTAGTTATATCAAACGACTATAAC BLAST
Tissueflowers
Gene nameLI_gene_22318; 
Additional informationdetails; 

Expression of Ll_transcript_27458

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_27458
BlastpPutative tRNA pseudouridine synthase Pus10 from Homo with 48.1% of identity
BlastxPutative tRNA pseudouridine synthase Pus10 from Homo with 48.1% of identity
EggnogResponsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs (By similarity)(COG1258)
KeggLink to kegg annotations (150962)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019449496.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;