Ll_transcript_27460

• Id Trinity: FTRINITY_DN51566_c0_g1_i3
• Name Transcript: Ll_transcript_27460
• Sequence: CAGAAATTATAAGGACGAAGACCTAAATTGATAAAATAAAATTAGCCGAACTATTTTTGAAGTAGTGCTAGTAGCCTCTCCAATGGCGGAACACAACGAA GCCACGAATGACATAACCGAACCCGAGTTGACACATGTTGCTGAAAACCCCGCCATCAACGAAAACGACGCTCCATGCGACTTAAACGGCGTGCTACAAT CTCTGCCTTCCAACGTCATCAATGACTTGTTATCCTTCGGGATATGTGTCCGATGCATTTTTCGGGTATTTGGTGTCAGAGGACGCATCTATGCCTCACC AGATTTGGCAGTGAACAATCTGAAGGATAATTTGAAGAGCTCTGAAAACTCAAATACTGCAAAGGAAACTAAGCTTTGCAGGCTTTGCTTAGGGATACTG CAGTTTAGATTTGTTGATGAGAAGGAAGTGGTGGTGAAAAAAGATAGTGTTGATGATATGGCTGTACTAATTGCTGAAATGGTAAAGAAGGAGGGTTATC AGATTGATGGTTTTTCCTTTGAAGTTTCTGTCCCACCTGTTCTACTTGAAAATGATAACTCGTTTTGGTCATATATGAAATCAAAATTTGGATCTGAACC TTGGTTCCAAGAAAAGTTACATACTGAACGTATCTCTACAAAGGATGCATTAAAATTTTCACTAGTATCTCCTCTTGAAAATCTTCTGGACTGTAAATCA AATATGAGTTCTTTCCGCATTCGTTTAACATACAATCACACTAAAGGATTGAATGGGACTGAGAAATGTTCAGACAACGATGAGCGTTCCAAGAGAAGAA AAACAGGTGAATCCAATTTAGTTGGAGAAAAGCCTTTTAGCAGTTCGGTAGAAAATGAATCCTCTGACTGGTGTGAATCCTTGCAAGAAATGGCAAATGA ACCCTGTCATTTTACCTGCGTTTTCTGCAGAGAACCTTACTATTTTGGTGGAAGATACCTTAAGTATTCACGAAATGTGAGTCAGACACGCTGGATCATT GATGATGAGAGAATGGGTGAAGCATCAGTTGAGGAAATAATTGGCGGAAACATCCTCCAGGCATCCCGTGGTGATAGTTTTAAGTTTCACGCTGCCGGCA GAGAAGATATCGATGTACGTATGCTGGGCCCAGGCAGGCCTTTCCTTGTTGAGGTGCAAAACGCACGACTTCTCCCGTCTGAACTGTTCGCCAAAGATAT AGAGAAATTGATAAATAACGTGGAAAATAAATTGGTTAGGGTGAGAAATCTGAATCTCGTTGGTAGTCATGGCTGGAACCTTATGCGTGAAGGTGAAGCA GAGAAGCAGAAGCAATATGCTGCTCTAGTGTGGATTTCTCGCCCTTTGAAGGATGAAGATTTGCAACATATTTCTTCACTCAAGGATTTGAAAGTTTTGC AGAGAACCCCTATAAGGGTGCTACACCGTCGCAGTCCTTTGGAGCGTGAAAAGATTATCCACTGGATGAAAGTGGAGACAATTGCTGGAAGTTCGCAATA TTTTCTTTTGCATCTATGTACACAGGCTGGGACCTACATCAAGGAATTTGTTCATGGGGATCTTGGTCGAACCCAACCTAGCATTGGATCAATTTTGGAC TGTAGAGCTGAAATTTTGCAACTTGATGTTACAGACATCAAAATGGACTGTTTCCTGGCCTAGTAAGACTTGCTTTTAAATGGTTAAGCCCTGTAGAGAA CCTGCTGGAGTAAATTGATGCCTTTTAAACAGAAAATTGTTCACCCAAAAAATATAACAGTTCAAACACCAAAGGCTATACCCCCTTGAGATCGGGGTTA GTTAAAGGAACATGTGTGAAACCTTCAACTTAATTAATCAATTAAGTTGAAGGTTAAGGTTTCTAAGTCTCCTACTTGCAGAGGAGAAAATGAGGGTGGG GACAAATGGATATATAGACAAGAGGAAATTCAATAAACATGAAGTTGATAAATTTACATATATTGATATTAATATTATTGCAATCTTACAGTGCTCTTTA TATACAGGATAAAAACATAATGATGCAAGTTTATAACATTATTTCTAGCACCATGTTAATCAAAATGAATAAATAACTATTGTATAAATTTAAAAAAATT ACAATAGGATCACACAATGAGTGATGACATATTATATTCATAACGAGATCTGTTAAAAGAAAAAAAAAAGGAACATATTAGTAGCCGTTTTCTTCATTTA TTGTGATTGTATACCAATTTTTTATATTTATCATGTATAATGTAAATATTTTCAGTATGAGAATATATTACTTAGCAATCATATATATTTTTTTAGTTAT ATCAAACGACTATAAC
• Tissue: flowers
• Gene name: LI_gene_22318;
• Additional information: details;

Expression of Ll_transcript_27460

FPKM

• FPAB: 0.7
• FPNAB: 0
• LF1: 0
• LF2: 0
• LF3: 0.5
• LF4: 0.7
• UF1: 0.8
• UF2: 0.5
• UF3: 0.4
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_27460

• Blastp: Putative tRNA pseudouridine synthase Pus10 from Homo with 33.52% of identity
• Blastx: Putative tRNA pseudouridine synthase Pus10 from Homo with 35.27% of identity
• Eggnog: Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs (By similarity)(COG1258)
• Kegg: Link to kegg annotations (150962)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449496.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;