| Id Trinity | FTRINITY_DN51570_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_26993 |
| Sequence | ATCTATTGGATCTTTGTTAAACTCTTAACCAATCCAATGCAAATAGCGTCGTTTTAAGTAGCACCTATTTAAATCCTGAAACGACGTCACTTTTGCTAAC TTTATCTTGTTATTATTGTCCAGTGAAGTGAAACACTGGGAGAAGAAAAAATGGCTACTTGTTCTTCTCGTTCATTGTTTGCTTCTTCATTCACTTCAAT TTCGAGACCTTCTTGTCAACCGCAATTTATCCCTTTCAACCTTCCTCATAAAACCGGCACGTCCCGGTTCAAATGCTCAGCCGGTCAGACCGGGTTCTTC ACCAAACTAGGCCGGTTGTTAAAGGAAAAAGCGAAGAGTGACGTGGAGAAAATCTTCTCCGGTTTCTCCAAAACCCGAAACAACCTCGCCGTAATCGATG AGCTTCTCCTTTATTGGAACCTCTCTGACACAGACCGAGTCCTCGATCAACTCGAAGAGGCTCTTTTAGTGTCTGATTTTGGGCCAAGAATTACTATTAA GATTGTTGATAACTTGAGGGAAGATATATTGTCAGGGAAGCTTAAATCAGGGAAAGAGATTAAGGGAGCATTGAAGCGGAATGTTTTGGAGTTATTAACC AGCAAGGGGAGTAAAACTGAACTTCAACTTGGATTCAGGAAGCCTGCCGTAATAATGATAGTTGGTGTTAATGGTGGTGGGAAAACAACATCTCTGGGAA AGCTGGCCCATAGATTGAAGAACGGAGGAGCTAAGATATTGATGGCAGCTGGTGATACATTTCGAGCAGCTGCCAGTGATCAGTTGGAAATATGGGCTGA AAGGACTGGGTGTGAGATTGTTGTGGCTGAATCTGAGAAAGCAAAAGCATCGTCAGTGCTTGTACAGGCTGTAAAAAAGGGAAAAGAGCTAGGATTTGAT ATTGTTTTGTGTGATACATCTGGACGTTTACACACTAATTACAGTCTAATGGAGGAGCTAATTTCTTGTAAAAAAGCTGTTGGGAAAGTAGTTTCTGGTG CACCTAATGAGATCCTCCTGGTTCTGGACGGGACTACTGGTTTGAATATGTTGCCACAAGCAAGAGAGTTCAACGAAGTAGTTGGTGTTACTGGTTTAAT TTTGACAAAGCTGGACGGTTCTGCTAGAGGAGGCTGTGTGGTATTCTCTTCATTTGATCTTAATGATATTTTCTATTTAGTGCTTAATAAATTTCCATTA TTGGTATTATTTCTTGTTGCGGGATGATCATGGTAAGGAATAAGATAGGAATCTCCGTTTGCAGGTCAGTGTGGTTGATGAGCTTGGAATCCCTGTAAAA TTCGTGGGCGTCGGTGAAGGTGTTGAAGACCTTCAACCCTTTGATGCAGAAGCCTTTGTGGATGCCATTTTTGCCTAAACCAATATTAGAGGTATGGTAT GTACATCATATATCCTTTTCATTCCTTTCAAGGTTTGAGTTTGAATTGTTTTCAAACTCGTCTGTGTTTCCGAAACTATCTTTTTTTCATTAGGGATGCA ATGTTATGCATGCTGTGAAAAATAAATTTCCAATATTACCACATGCCACTTGCCTGTTAGGATAGGACAAGGTTTGTTTGGAGTGAGGAGTGTTAAAGGT CTTAGACTAATAGGTTCAGCTATCTGAAAAAATATCAAAGTAAAAACATGACTATTACTTTTTTGGGTAAGTAGAAGTACTCTAGCCTTGGAGTTCCTTT CTTGCATATTTTCTGTTTCAATCTACTATTCTTTTGATAGTGCTGTGTATGTTACACATTTCAGAATCATTTATAGCAGAACAACT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_22324; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_26993
| Blastp | Cell division protein FtsY homolog, chloroplastic from Arabidopsis with 78.31% of identity |
|---|---|
| Blastx | Cell division protein FtsY homolog, chloroplastic from Arabidopsis with 82.35% of identity |
| Eggnog | Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)(COG0552) |
| Kegg | Link to kegg annotations (AT2G45770) |
| CantataDB | Link to cantataDB annotations (CNT0000908) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461002.1) |
| Pfam | SRP54-type protein, helical bundle domain (PF02881.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |