Id Trinity | FTRINITY_DN51570_c0_g3_i1 |
---|---|
Name Transcript | Ll_transcript_26998 |
Sequence | TCTGGACGGGACTACTGGTTTGAATATGTTGCCACAAGCAAGAGAGTTCAACGAAGTAAATTCTTGTTCATCTTTTAAAATTGGATATTTGGCTTATCGT GTTACGGAAAAATTTCACTTATATTTAAAACCTTGCTATCTATCTATATAAGAATACCAAGCGCTAAGTAAAGTTGCATGGATACAGATGAATTCTGTTA TGGGTACAGCAGGGTACAAAAAACTTCCAAAAATCTAGAGTATGGGTATGACAGGATATATCAAATAGAGATAAAAAATATAAACAAGTAATTAAATCAT AAGATAAATACAATTTTCAAGGATGTACAATTCTACATCAAATCTTTCCAATCTGGTGGTAGTTTGATTGATTAATTGTACTATAACAAGTTCCTCCTTA CAACAACAACCAATGCCTACACCACCACTTTTCTATCAAAAACCAAGATACAGGTTCCTTATTAGTTTGACTTAATTCTTTGATGCGTGTGGGGGAACAT TTCTGCAGTAAGGGAGTGGACCTTAATTTGCTTAGAAACGCCGATTTCTAACTTAATAAGTGGTAACAATACTAAAGTTCATTCTAGCCCTTCCTGTGTA ATGTTTATCGTGATTCCCAAATCATGGCCATGATTTAAGTATGAGATGCTGGTGTTCTAAGGGAGAGAGATATACACAGAAATTGTTAGTGGATCCTTTC ATGTGCTTTTTCTTATCATATGGTCATGTGTATGAGAGAGATAGACACAGATTTCCACTATAACATATCTCCTCCACATACATGACAACGAAAAGCATGT GAGAGGATTGGTGTGTTTTCAAGAGACAAGATGTAGCAAACAGTTCAATCTTAAGGAAAATGATGTAGAAACCAGGCCCTCTGAGAGGAATTGAGGGGAT ATATTAGATAATGGAGCATCATGCACATATCAAAAGGGGACTCATGAAAGTTCTGATAGTGGTTCATTGTGTTGATATGTATATTACATCAATCTGCTTT CCAATGAAGGGTCTGTGAAAATGTTTTTTTAGTTTTACAATATATCATGTCTGAGTTTATGACTCTTGTTTTTCATTGCCTTGATTATTTTGGTTATTCC CGCCCTTAACATTTCAAAATCTGGTATTACATGTGCCTCAGTTTCATATTAACTCACTGTTAGCTGTCATTGAAATTGTTTTGTCTCAAAAGCCTCTGAA CTTGACACAGGTAGTTGGTGTTACTGGTTTAATTTTGACAAAGCTGGACGGTTCTGCTAGAGGAGGCTGTGTGGTCAGTGTGGTTGATGAGCTTG BLAST |
Tissue | flowers |
Gene name | LI_gene_22326; |
Additional information | - |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_26998
Blastp | - |
---|---|
Blastx | Cell division protein FtsY homolog, chloroplastic from Arabidopsis with 81.25% of identity |
Eggnog | Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)(COG0552) |
Kegg | Link to kegg annotations (AT2G45770) |
CantataDB | Link to cantataDB annotations (CNT0000926) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_013444937.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |