| Id Trinity | FTRINITY_DN51704_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_26376 |
| Sequence | GTCCCTAAGCTTCTAGATAGTTGGTAATCTTTTGCTAACATCATGGGAGAGGTGGCAGTAATGCACTCTGAGCCTCTGCAGTTAGAGTGCTATGGCATGA ACCGTATGACTGAGAATGATGTGCATACTCCAAAATCAAATGAGCCCATGCCTGAAGAAGAATCAAATCAATCAACAGATGACATTAATATCATTGACTT GCAAGGGAAAGGGTACATGGAGCATGGATGTCAACATTACCGAAGAAGATGCCTAATCAGGGCCCCCTGTTGCGATGAGATTTTTGATTGTCACCATTGT CACAACGAGGCAAAAGTGAGTAAACTCCCTGATCTAGTATTTGATTGTAATTGTATGTGTGAAGTATTTTGTCTCTGGTTATTTACATAAATTATATGGT TCCAGCTTATTTCTTATCTGTAACCAATTTTCTTGGATTACTTTTATCCTAGACAATGCTTATTTCTTTACTCAGTTTTGATGTGATCTATCATGGAAAA TGGAAGGTAAGGTTGTGCACTCTAATTTGTATAGCTGACAGTGAGTTGCCGAAATGGGATCATAAACAATTATCTATTCATTCAACATAATTCTGTTTAA TGAGGTGAGAGGAGGGACTTCCAATCTTACCAAGTCTGGAAGGGAGCCAAAATTAAGAGATAAAAGGCTTTTGTCCCCTTCCATCCTATCTAAAATGTTG AAACAAACAAGCATTTTATTTATAAAAACCATTCTCTCCCCCTTGCTCCATTTCCCCAACCAAACCGTCCCAAATGGGGCCTCTGTCTGCTCCATCATGC CAGACTTTGTCACTTCTGACTTTGAATTTAGCATGAAATTGCCTCATTATGTTTAATACTTGTATTGTGGCTTTCCTTTTTGTTTTGCAATGACTTACTT TTGTTATAATGTTTGTCTACAGAATGATACCAATATTGATCAAAAGCATAGGCACAATATCCCCCGCCACCAAGTCAAACAGGTGATATGTTCACTTTGT GGGACTGAGCAAGAGGTGAGTCTAGGTTTTCTTTAATATCTGTGTTTATGTTTCCGTTATTGTTTGCAAATTATAAGGGACAATCTAAATACTAATTTCG TGTTGGACATGGTCCTCCTATTCACAATTATATTGATGGATTATTTGTGATCCACCATCTACTTCAAAAATATCTCAATATTATTTATCAAACGAGAAAG AGACTTGCTCTGCATGTGAGTGTATATGCATATTCACAAGCATAAAGGACACTGAATTAATGTGTTAAGTTTATCACTTTTTGAAGGTTCTTCCATATGT CTAGGCGAAACTGTTGGTGGTAGTTTCGTGACTTTCATCTCTAAGATATTGACTAGACAATATACCACTTGAAACTGCTGGGTTAGTCCCGTATCATTTT ATCAAACAAGTCATCCGAGAGCTGAAATTCATCATGTGCAACCTGCATTGTACATTTGAAGCTAAGTTTTTTATGTGCTGATTCTCTTGCTTTCATTTCA GGTTCAGCAAAACTGTATTAATTGTGGTGTTTGTATGGGCAAATACTTCTGTGAGACATGCAAGCTCTTTGATGATGATGTAAGTAGTTATCTTCGAACT GAGGAATTTTTTCTTTTCACTTTTTTTTATTTCTTCTATTCTGTCTTTGATAAGATTTCTGTATCTGAAGTGAGGACAAACCGGTGTAGTAAGTATCCTC TCTCAAATATAGCATGAAGATTAGTCATGGAATAAAATGATTATATGAACTATTTGCTACTATCTAATTTCTGTTATGTTCTGCAGATATCTAAACAGCA GTACCACTGCAGTGACTGTGGAATTTGCAGGTATGATATGCTAATCTGGTTATTTGTTTGAAATGTCAACACCACCACGCTTCATTTTAGGCCGGGGCAG CACATCGTTGTGTTTGGAACTGGGTGGTTGGTGAATTATTTTTCTTAGTTTTTAAAATTAATTTGATTATTTTAATTTTTCTATTAGAAAATCAAATTTA AGTTAGCCTCCTTCTATAATAATAATTTATTTATCTAGCTCAATCTGACATGGGGCAATTTCTTAAAAGTGGAAAAGCAATAGCATGTCCTTTTTCTGTT TTTTTCACTTGACTTTAAAGTCACATTCTTATTAAGTATATATTGTATCTTGCTTTTAGACTGACTGTGCCTTGTATTGAAATTCAGACTGATTGATTCT GATATTTTTAACGCAGAACTGGGGGAAGAGAGAATAATTTCCATTGCGATAAGTGTGGTTGTTGCTATTCAATTCTGCTGAAAAACAGTCACCCGTGTGT GGAACGAGCAATGCATCACGATTGCCCCATTTGTTGTGAGGTAACATTTTACAATTTTCATGATTCCTTCTTACCAGTTTGAAGAATTACTCAAGGCTGA TTCAAGCACACTCAAATTTGTGAATGTAGTATTTATTTGAAACCACAAAAGATATCCTTGTTCTGCCCTGTGGACATACCATCCATAAGTGTTGCCTGGA AGAAATGAGAAAGCATTTACAATATGCATGTCCTCTATGCTCTAAGTCCATTTATGATATGTCCAAGGTTTGGGAGAAACTTGACCTGGAGATTGCTGCT ACACCCATGCCTCCACCATATCGGAATAAAATGGTCAGTGTTCCTTTTCCCTCATTGATGATTGTGTATTATATGTTCAATGTAGTGATTCAATTTGCGG ACAACATTACGTGAAGCGGCCACAATATTGCGATTGTGGTGACCGCCACAACCGCATCAAATCGTTAGTGCAGTGTGACACCAAATCGCAATGACGCGGC CACAGTCTAATCACATCGGACTGCATTTGGGCCGCATCAGATGACATTCCCTGCTGATTTATGAGGACCGATGGTGTTATTATGTACAGGTTTCGATCCT GTGCAATGATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_22648; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_26376
| Blastp | Probable E3 ubiquitin-protein ligase RZFP34 from Oryza sativa with 53.12% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase MIEL1 from Arabidopsis with 53.62% of identity |
| Eggnog | ring finger and CHY zinc finger(ENOG410XXHF) |
| Kegg | Link to kegg annotations (4324695) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457803.1) |
| Pfam | CHY zinc finger (PF05495.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |