Id Trinity | FTRINITY_DN51761_c0_g1_i8 |
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Name Transcript | Ll_transcript_26162 |
Sequence | GTAGCAGTTGTGCACAAAGTTGGGTACCTAATACCGTAATAGTGCATCTCACTCTGCTCCAACCTCATTCCCTTATTATTCTCAAAACCAATTTCTCAAT CCTCACACTACTTCACTTCTTCTCTCTCTATTTCCTTCTTCTTATTCCTCCTCAACTTTCACATGGTATCTCCTCCTCCTTCCTATCATACTTTATATAA CATGCTTTATGTTTCTCCTTTCTTCAAATCACTTTTCATTCTTTATAAACCTACCTTTCCTAATCTCTCTTTTCCGCTACCTGAAAAATGATCGTATATT GCAACCAATACATACCTGCATATAACATATTATTTACCAACTAGTGTTTGATTCTCCTAAAGTAAGGTCTCAGATTCGAGTCTTATGGAATGAAAAAATG TCCGCTAAGAGCCCACATACTATGAAATTATGGATATTCTCGGCTCGGACAGGATTGACTCTAATGCGAGGAAACCAAAAAAATATAACATATTATTTGG TTAGAACATGTTAGCTAATCGCACAATATAATACTATGTTTTAGTTGTGTGTCACTAATACTTTACTATAATGATTCTCTCTGTGACCCATGTGAAAGCC AAACTAATACTTTATATTCATTACTCTTATCACACTTTCCCTTGCAATTTTGTCAATGCCAACCTGGGTTTACTTCTACTCATTTTTTTATTAGAGTCAC ACCCTTTGGTAAAAAGTTTATTTTTTTGTTGTTGTCTTCTTCATTTGACGCTAAGGGTGCGTTTGAATTTCCCAGAGAACCCTTTAAGAAAGTGCATCCT CTTCTTTAAGTGTTGGAAACTTAAAATCTTTTCTGCATGTTTGGCATAACGTGATAAATGAAATGATCACTAATTTTTTATATGTAAAACTTGGTTTTCT AAATCTGAATTGAACGAATTCTGACCCAGCCTATAAGCTAAGGAGGAAATAGTTGCATCCGATTTCAAAGGGAATGGGTGGGATACAAAACTAACCACTC AAAGCTGTAATTTATTTATTTATTTTGCATCAATGATCATTCTCCATAAGGCAATGTGTTAAACAATGTAATGCAGGAAACCGGAGGGAAGGACACAAAT ATTGTTCTGACGAAACCATTTTCATTAGGAAGTGAATCAGATAATTCAGATCCTAGCTATAGAGCCCCTAATATCCTGAATCGAATTTTAAGTCTACTGA AGAATGTCCGGCCAGGAACAGATCTCACTCACTTTCAGCTACCACCTCTGTTTAATTTCCCAAAGTCTCAACTTCAGTGCTATGGTGAATCAGTGTACTG TACCGGTTCGGACTTGCTGAGCAAGTGTAACAGTGAGCAGAGTCCAGTGGAGAGGTTCAAATCTGTGGTAGCATGGAGCATATCTACCACACGCCCTACA TCTTTTGCGGTTGCTCCTTATAATCCCATTCTTGGAGAGACCCACCATGTTTCCAAGGGCAATCTCAATGTGCTGCTGGAGCAGGTTTCTCACGATCCTC CAGTATCTGCCCTCCATGCAACTGATGAGAAGGAGAACATTGAGATGACATGGTGCCAGCAACCTGCTCCAAAGTTCTGGGGTATCTTCACATTTCTCTA GCAGCATAAACAGCTAAAGTTCACACTCCCCTAACTTTGAAAAATGGTCTAAAAGTTCCTCTTTCTTTGCTTCATGAGCACTTTTGTTCTGTAACTATCA AAATGTGCATCATCATGGTCATGCAATTTTCAATTTTGTGCATTTTGATGCAAAATCATGTCCCATGTTAACTTTTGGGCAGAAATCATCATTTCAGAGG TATAACCTTGAAATATAAATTAAAACATTAAACTTGGTTGCTTTTAGTTGTGACATAGCTAGTGATTAAAGTAGTTCATCCAGACATAATGTGTTAGCGC TGCATTTGTTAGAATTACTACAAATTATAGATTTTTTTTACTTTGATTAAAGTAGGCATGGGAACTGTACACTAAACCATGCTTATAAGGAAATCATCTT TCATCACATTACCACATGATTGTTTTGGATTGTTATTATTCCCAAATGATCTAAAATAAGTACTTAAATCCTATTTTCAAGACAAATTTGAAGTTCTAAA TGCTAGCCCCTTACTCAACAATGTTCTATAGATTCATGTGTGCATCACAAACTAAATATGCAGGCACATCAATTGAAGCTCAAGTGCACGGTAAAAGGCA GCTGAAGCTCCTAAATCACGGAGAAACATACGAAATGAATTGCCCTCATCTTTTAATTAGAATCCTTCCAGTTCCCAGGGTTAATTGGATAGGCAATGTT AATATACGGTGCCTAGAGACAGGCCTAACAGCTGATTTACTCTACACATCAAGCCATTCTTTTCTAGGAATTGGAGGTAATCATAGATTGGTCAAAGGGA AGATCCTTGACTCATCATCGTCAAAAGTTCTATATGAAGTTGATGGTTATTGGGATAGCACTGTAACACTGAAGGATACAAATAATGGGGAGACCAGAGT GATATATGATGCAAAAGAAGTCATTTCAGGACTCCAAGCTCCTATTGTCAAGGCTGCACAGAGTGTGTGGCCAACTGAATCAGCCCTTGTTTGGAGTCAG TTGAGTCAAGCCATTCTGAACAATGATTGGGAGAAAGCAAGAGAAGCAAAGCAACTTGTTGAGGAAAGACAGAGGAAGATCATGACAGAAAGAGAGATAA GTGGAAAGGTTTGGGTTCCTAAGCATTTTGCAGTGTCCTACACTAAAGAAGGAGGTTGGGAATGCTCACCCATTCATAAATGGGTTCCTGCTGCACCTAT CATAGCCTGATAATCATTATTGTAATCATTATGTGACTATGAATATGATATCTTCAATTACAGCCCAAATGTCTCAGTATGGCATATGAAACATTGTAAA GTGACTCCATTTTTTGGTTAACTTCAATGCCTAAGAATAAAAGCCTAAAATGTGAGGCCAGCTTATCACACCAACTTGGAATTTCTATTTCCATAGCATC TAAATCATTTGTGGCATAAGGTAGCTGTTATTAAGAACAATTCTTAATTCTTCTGTAACTTTCTCTACAAGTTACAAGATTATACATGTTTATTTTTATA TTTCGAAAACCTAAAAâBLAST |
Tissue | flowers |
Gene name | LI_gene_22799; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_26162
Blastp | Oxysterol-binding protein-related protein 4C from Arabidopsis with 50.23% of identity |
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Blastx | Oxysterol-binding protein-related protein 4C from Arabidopsis with 49.34% of identity |
Eggnog | Oxysterol-binding protein(ENOG410XRW6) |
Kegg | Link to kegg annotations (AT5G57240) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442475.1) |
Pfam | Oxysterol-binding protein (PF01237.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |