| Id Trinity | FTRINITY_DN51762_c0_g6_i1 |
|---|---|
| Name Transcript | Ll_transcript_26351 |
| Sequence | AAAAAGAAACTTATAAGTCGGCCACAATAAATAACAAAGCTCATCGATTATTTTCTCGTTTTATTTTTGAATAAGAAAAATTTATTATTAACCATCTGTA ATTCTGTATAATATAGAGAGTACATAACCAAATCGGTTTTACTTCTTCCCCGATCTTCTTGCGCCGCCGTATCACCACCGTCGCAGTCTCCCCTCCGTCC AACCTCATAACCCCGATATCGCGTAACCGATTTAGGGTTTTGAGACTTCCACTCCATAATCAAGATGAAGAAAGCTGGAGATGAAGTTGTTGACTTAGAC AAGACCACTGTTACAATGGAATCTGAGATTGGTAGTAGTGGTGGCGGACTCTACCTTCCTGGAAAGGATAGAATGGTGTATGTTCCTCCAGAAAGAAAAT CTCGTTTAGGACTTGATGTCCTTGCCATTGCGAAACGGGCTGAGTCTCAACCTGATGGAGGGGGATTCAAGGTTCCAAAAGAAAGAACCACATCCATTGC AGCATCTGCTGAGGAGGATGAAGATAAGTCTGAGTCTTCTGCTGTTATTGATGAAGGCGAGCATGGCAGAGTTGATAGTAAACTTAGACATGGTAATAGG AGATATCGTGAGACCCCCAATGAAACACCAGAAAGTTCTTTGACTGTAGATCACCATGGTAGTACACATGGGACTCGTTCAACTGAGCATTTGGGTTCAA GTGTTGCTGGCTCGCCTTCTGGATATGACAGGAACGATCATAGGAGTGAGAGGAGACATTACAGGGATGATTCAAGAAGTGATAGCAGTAGAGTGCGGCA TAGAAACAATTATGAAAGTAAGGAGCCTTATCCAGAAAGGGATTCACGTAGTAGATATGACCATGATTATGGTAGAAAGCGAAACAGATATGATGGTTCC AGGAGAACACCTGGCAGGTCTGACTGGGATGATGGCCGCTGGGAATGGGAAGATACTCCAAGAAGGGAAAGTGTCTCTAGTTCTAGACGTTACCAACCTT CACCATCCCCAATGTTTGTTGGTGCCTCACCAGATGCACGATTAGTTTCTCCATGGTCGGGGGGCCATACTCCCAATTCATCCTTTGCTGCATCTTCTCC TTGGGATCATGTTTCTCCATCTCCTATTCCAATACGTGCTTCGGGACCTTCAGTTAAATCTTCCATTTCTAGAAATAATAGGTCTCATCAGCTCACTTTT TCATCAGACACTTCAAACACACGCGAGGATGATGTGGCAGATAAGTTTGACTTGGGTGAAGAGCAGAAGTATGAGATTACTGAAAGCATGCGTAAAGAAA TGGAATACGATGCTGACCGAGCATGGTATGATCAAGAGGAAGGAAGCACAGTGTTTGATACAGATAAGTCATCAGCTTTTCTTGGAGACGAGGCTTCCTT TCAAAAAAGAGAGGCTGAGTTGGCCAAAAGACTGGTTAGAAGAGATGGGACTAAGATGTCCCTTGCTCAGAGCAAGAAATTGTCTCAGCTCACAGCTGAT AATGCTCAGTGGGAGGATCGGCAACTGTTGAGATCAGGAGCTGTTAGAGGTACTGAGGTTCAGACTGAGTTTGATGATGAGGAAGAACGCAAGGTTATTC TTCTTGTGCATGATACAAAGCCTCCTTTTCTTGATGGCAGAGTTGTTTTCACTAAGCAGGCAGAACCAATTATGCCAATAAAAGATCCAACATCTGACAT GGCTATAATTTCTCGCAAGGGATCTACTCTGGTCAGAGAAATACATGAGAAGCAAAGTTCGAATAAGTCTCGCCAACGCTTTTGGGAGCTTGCTGGCTCA AATCTTGGTAATATATTGGGTGTTGAAAAAACAGCAGAACAGATTGATGCAGACACTGCTGTTGTGGGTGAAGATGGTGAAATTGATTTTAAGGAGGAAG CTAAGTTTTCACAGCATTTGAAAAAGGGAGAAGCCGTGAGTGACTTTGCTAAGTCAAAAAGCATTTCAGAGCAAAGGCAATATTTGCCCATTTTTTCTGT GCGAGAAGAGTTATTACAGGTGATTCGAGAAAATCAAGTGGTGGTAGTGGTTGGAGAAACTGGTTCTGGAAAGACAACACAATTGACACAGTATCTGCAT GAGGATGGATACACTATAAATGGCATAGTAGGCTGCACCCAACCGAGGCGTGTGGCAGCTATGAGTGTTGCCAAGAGAGTTAGCGAGGAGATGGATACAG AGCTGGGCGATAAAGTTGGCTATGCTATACGTTTTGAGGATGTGACTGGGCCAAATACCATTATAAAGTACATGACAGATGGAGTACTTCTACGTGAAAC ACTCAAAGACTCTGATCTAGACAAGTATCGGGTTATTGTTATGGATGAAGCCCATGAAAGATCACTCAGTACAGATGTTCTTTTTGGAATATTAAAGAAG GTTGTGGCACAACGTCGCGATTTCAAGCTGATTGTTACATCAGCAACTCTTAATGCACAGAAATTTTCGAACTTCTTTGGAAGGTAATTCTGGTTCCTTA TGTACCATGCTTTCCCATTATTAAGTTTTGCACTGTTCAACCTAAATTGGGTATACTTGTAGTGTGCCTGTTTTTCATATTCCTGGAAGAACATTTCCTG TGAATATATTATGGAGTAAAACTCCAGTTGAAGATTATGTTGAAGGTGCAGTGAAGCAGGCTATGACTATTCACATAACCAGTCCTCCAGGTGACATCCT TATCTTTATGACTGGCCAAGATGAGATTGAGGCAGCTTGCTATGCCCTTAAGGAAAGAATGGAACAGATGGAGTCGTCTTCAAAAAAAGAAGTCCCTAAA CTCTCAATTCTTCCCATATACTCTCAGCTTCCTGCAGACTTGCAAGCAAAGATATTTGATAAAGCGGAAGAGGGAGAACGTAAGTGTATCGTTGCCACTA ATATTGCTGAAACATCATTGACCGTTGATGGTATCTACTATGTCATAGATACAGGCTATGGTAAAATGAAAGTATATAACCCCAGGATGGGCATGGATGC TCTCCAAGTCTTCCCTGTCAGTCGTGCTGCTGCTGACCAGCGTGCTGGTCGAGCTGGTAGAACTGGGCCTGGAACGTGCTATCGGTTGTATACGGAGAGT GCTTACTTAAACGAAATGTTGGCCAGTCCTGTTCCGGAGATTCAGAGAACTAACCTTGGCAATGTGGTCCTGTTGCTGAAATCTCTTAAAGTTGAAAATT TACTTGATTTTGATTTCATGGATCCTCCTCCCCAAGATAATATTCTCAATTCTATGTACCAGCTGTGGGTCTTGGGTGCCCTTAATAATGTTGGGGGTTT AACTGCTCTTGGATGGAAAATGGTCGAGTTTCCGCTGGACCCTCCACTTGCTAAGATGCTTCTGATGGGCGAACAGTTAGAGTGTCTTGAGGAGGTTTTG ACAATTGTTTCCATGCTTTCAGTACCATCTGTTTTCTTTAGACCCAAGGACCGAGCAGAGGAGAGTGATGCTGCTCGTGAAAGATTTTTTGTGCCGGAAT CTGACCATTTAACCTTATACAATGTTTATCAGCAATGGAAGCAGCATGATTACAGAGGTGATTGGTGCAATGATCATTATTTGCATGTTAAAGGTCTAAG GAAGGCTAGAGAGGTGAGATCCCAGCTGCTTGATATTCTCAAGACTTTAAAGATACCCTTAACCTCCTGTTTTCCGGATACAGACATTGTCAGAAAAGCA ATTTGTTCAGCATACTTCCACAACTCCGCAAGATTAAAGGGTGTGGGGGAGTATGTTAACAGCCGGAACGGTATGCCGTGTCATCTTCATCCCAGTAGTG CTCTCTATGGTATGGGTTGCACTCCCGACTATGTGGTTTATCACGAGTTGGTCCTGACTTCGAAGGAGTACATGCAGTGTGCCACAGCAGTGGAGCCGCA ATGGCTGGCCGAGTTGGGACCCATGTTTTTCTCTGTTAAGGAGTCTGATACATCATTGCTGGAGCATAAGAAGAGACAGAAACAAGAGAAAACAGCAATG GAAGAAGAGATGGAGAATTTGAAGAAGGTGCAAGCAGAGGCTGAGAAAGAAATGAAACAGAAACACAAGGAAAAGATGGCTAAGCAGCAACAGCAAATCT CCATGCCGGGTTTGCGAAAGGGTTCTTCCACTTTTTTGAGACCAAAGAAGTTCGGTTTGTAATAACACTATCAAGTATTTACTTGTAGTAGCCTCATACA TTCTCATTGTAATAACAAAGTTAGAATTTGTACCCATTAGGTTACTGATGGTCTCATATGAATTCTAGGTAATGCACATTCATTATTTAGTTTGCTTTGC AACCTTGAGCACTGTATCTGTTGATATATTGTTTTTACTCAAATCAAACAACTTCAATTTGTTAATTTACATTAACAAGAAATGACAGAAACCGTGTTTT GAAACGTTAAACâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_22811; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_26351
| Blastp | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 from Arabidopsis with 67.12% of identity |
|---|---|
| Blastx | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 from Homo with 66.31% of identity |
| Eggnog | helicase(COG1643) |
| Kegg | Link to kegg annotations (AT5G13010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457682.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |