| Id Trinity | FTRINITY_DN51795_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_26420 |
| Sequence | GTTCATCATTTTAAATGACTCACTATCTCTAAATCTTATACGTAGATATACACCCTAATATATATTCCACTCCCAACAAAACCAAAATTGATTTCCACGA GTACCAAAATCATAAAACAATATTTAAATTTGTTAATAAATTTGCTCCAAATCAACACCAAATTGAGAACATCTCTTCCCATTCCCAGATTCAGAGTTCT ATAGACTGCACCATCCTTCAATTTCTTTACGGAGGAGAAGTCACCAGAAGCGTAAAAAATGGATATGTATATCCGTGTTAAGCGTAGTAAGACAACATAC TTCATCAAGTGCAAGCCGTCTGACAAAGTTCTTGACATAAAGGAGAAGTTGCAGGAACTCATTGATCAGCCAGCTAATGATCAAAGGTTAGTTCTACCTG GTACAAGGGAAGTATTAGAGGACTCTAAGACTCTGGCAGAGCAAAAGGTTGAAAATGATGCTGTTGTTGCACTGACCTTCAGAAAAGGTAATGTATATAT TATCGTTTTCCTCATCTCCCCTCCCCCTGGCCTCCAAAAAGTACAAGAAATTTTACTCATATATGTTAGGATCCAAGTGCAAGGTATGACTGAGTCCTAC ATTGGAAGTATAATATTCAATGTGAGGTTGATAATTGATATTGATGTGGGCTTTCCAACCACAATGGCTAGATTTTGTACAATGGTTTGCCCAAGGCCTC TCACTTGATATTAGTGACTTCCACCATGTCTCTCAATTGCAAATGAGTGGCACAGGTAGTGACACTGGCATTGCAGTGTTCATCCCTAGTCAAAGGGCTG TGGAGTCCAATTGCAGGATATGGGACTTAGTCCCACATAGGACGTATTCGATTTCCGATGAGGATTTATATGGACTTTGGCTCTCCCACCATAATGGCTC ACTTTTGTGGTGTCCTGAGATTTGTATCATTGTTGCCCATTGGTATACCATATACCTGTTGTCAATTTTATTTCAAAATTTGGGAATTGGAACACATGAT ATACTTGAAAAGTTTACCTATGTTATTTCTTGTTTGCCTCTTTATTAGTTGAAGGAATACATGGTATACCTATGTTGGTAGGGAGTAGGGTGAATCTCTA CTTTGTTCTTCATTTGTGTTTATGCTGCATTGCTTGCATATATGGACAAGATGAGAATGAGATAAAGGATTTATTAGTGAATTTTCTAAACAGTAGACAA GAGGGTTTTATTAGGGGTAATCATTTTACTTCCACTGGTAAATTGCAGCAATTAGGCACTGCTTCTGAAAGCATTAATACTGTAATAATACTGAAAATTT TGGGCGAAGCTCACATATTCACAGGGTACTTTAGGAATTTCCTTATGTATTTTAGGAATACATAAGAAACTCTAAATTTCTTTTGTCAAATATCAAAGCT GTGTAGGAGTTATGTGCCTTGGTAGATATGTAATAAGCAAATCATTTAGCTTTTCTCTGTACTATATTGGAGATGATTATTTGTCATGTTTTATTATTTA ACTTTGAAGTCCTCCCCCCTCCACTGAAACAAAAAATTGAAGTGCTTCCCTGTTCCTTATCATGTCTTGTGTAGTTTTAGTCTGTATTCCATTCACATTC ACTGCATACTGTACAAAGTACAAACAACCAAGCCGTATTTGACCATTGTAAATTAATTCTTTAGCAATTGCTACTTGTAGCATCATATTTCTTTGGTTAG CTACTTAGCAGATACGTTTTTGGCTGTACTGGGGATTTTCGTTTGCCATTGGCTTCCATTTATCCACTGTACAAAGTCTGACACCGGAGATCATTAGATT CGTTGTGGGATTTTTATTTTCTTTTCAAACTTAACATTATTCAAATGCATTCTTCCAGTGTGATTCCTACATTTTTTTATCTTGTCAAGTCCTAGTTCTG GATCATGAATTTTTTTATTTTTTCTCATTCTGAAAACTGCCATTTGCAATATGTTCCTGTCGATTTATTTTTATTTTTTAAAATTTTGCATCGAAGATCT TTTGTCCTCCTCGCGATATCATATTTGCTTCTCCATAATATTTTTCTTATTTTACTTCCAAAAAAATATATTTGGGCAGAGGAATCATCATCCAAGTTTT AATAGTACTTCTATAAGTTATTCCCAATTTGAGATAGAAATTGATTGTTATAAAGGAGCATGCTATGGTTGTTTTGTTTAGACTGACACCCCTGTTCATT TCATACCTCAGCAAAAAAAGCATTAGGATAGGACTTTATGCTAACATTGAAGTCAAAACTTACCCCAAAGGTCACTAAAAGATGTCATGTACCTTTTACC ATGTCTTTGTGAAACCATAGGGGCCAAGATTGCAAGGGTGAACATAATTCCTTTCAATCCGAAGGTTAACTTGTTCAAATGCGATTTTCACAATAGTTGC AGTTGTGAAGTGATGGGTTGGACTGAGATTCATGGAATTGAAGTTGTCAAAAGTAAATAATTAACATATTGAGGGAATGTATTATATAGGTTGTAAGAAA CTACTGAAGATCTTTTGGATGGACATTCTATTGATTCTCTAATGTATGTGCCTACCCTATTATTGTTTTTGCTTTTCAGAAACAACATAATGGAATTTTT GTCTATCTGTTGCTTCCAGATGATAATGAGTTTGAGGAGGTCAACATTGTTCGGCCGAATGATTTCTACCAGTCACGAGATGGAGACAGCGCCAACTGGT AAAGCTAAACTCCAGCCACGGCCGACTTACACCAACCGGTACCTTTGGGCTCATTGAATCCTTAAACTATTTTTGTAACTTCTGTAAACTAAAATTTGTA TGAGCTTTAAGTACTATCCCACCGGTTGATGTACTTGTTTGTATAACACTGAAATTGTTCAAATTTGTGGGCTGTGGCTAAGGTATTGTTTGGCCTTATA CTAATGGCATGCTAAAGGACTTACTAAATTAGGCTCAGATCATTTTGAAGACCTGAACCATTCACATATTTTGGGTCATTTACATTTTAACAATTCTTGG GGAATCATAGACTATAGGTTAGTTGATTAATCTCACTCTTGGAAGGTCATTATTTTATTTTATGATATGGTGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_22891; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_26420
| Blastp | Elongin-B from Homo with 29.81% of identity |
|---|---|
| Blastx | - |
| Eggnog | Transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B)(ENOG4111UGJ) |
| Kegg | Link to kegg annotations (6923) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415744.1) |
| Pfam | Ubiquitin family (PF00240.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |