| Id Trinity | FTRINITY_DN51810_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_186590 |
| Sequence | ATGTAGTGATATGTGACATAGATAGTCTTGATTTCAATGCTTTTTTGTTGATCGTGGTAGGGTGAACATGAAGCTATGTTAAAAGTATGTAGGTAGTGAA TTGGAAGTGGTATTTCATGAAAGACTTGTTACGGTTATATCGTGTTTACCACAAGAAAATGCACAATGCACCTGTAATCGCAATGTAGTTTCGGAGACTG TCGAAACCATGATATTGTGGCATAATTGTGGTTGCCAGTCATAGTTTAGAACCTTGGGCTGATGGTTATAGGATATAATGGGTGTGCTTTACCGTGTCCT ATTCTCTATTTGTAATGATTTGAACCGGCTATTTCCTTGCAAGCAGATTGAGAAAATGGAGAAACTGCTAATGGAATCAAGAGAACGATCACTGGACCGA GAATTTTGCCAAAGCCTTGCTTCAAGATTCAACCGCTCCTCTGGTCGTGCTGGCAAACCTCTCGTAAAAGGGACTGAGGTTAATGCATTTTTTGACTTAT TTGTCTTATTTACTTAAACTATGAACACTAGTTCCTTCAATATCCTCACTCTTTTCTGATATCAAAGATCTGATTTGCCTGTGATTTTTAGTTATGTATT CTTTCTTCTATTGTTTTAATAATCATTCGCTTACTTGGGGGGGGAATTTTCAGATACAAAGTTGGTTTCAGACTAGGCTCCAAGACTTACCAGAAGTGCC TAATAATGAGCCAGTGTCCCCAAAAGACATTGAGTGTAAGGAAGGTGGGGCTTCTTGCATGCCTTAAGATTCTTTAGAATTGCTTCGACTTATGCTTTCT CGAAGCAGTAAAATGTTCCAACATGAGATTATTTTATTATAGTTGTAGTGTACCATTTCTATGGGGTCGATGCTACAAATATTTTTTTATGTGTAATTGC TTTAAAATGCTACATTTGAAATGTGATAATATGACTTTTATGCTAAGCTGCTTTATGGTATTAGGAGCATGTTCGGTAGAAGAAGATAATGACAATGAAG GTGAGGAAGTGACTTGCCAACAATGAAGGATATGAAAAATGACATAGTGCTCCTTGGGCTCTTTCTCACTTTCTATTTTCCGTTTTTTTGTTTAGTTAAA TTCTGGCTATACTTGAGTTTATAGATATCTTGAGGCAACTAGTAATCAACAGTATCAAATGAGCTCATATTGCAAGGCTGTGCCTGAAATGATTGCTTTG CAGGAGAAATGATACGAGACCCATCAGAGTTGGAATTTGAAGCAAGGTCATCAAAAGACGGTGCATGGTATGATGTTGAAATGTTTTTAGCTCACAGATA TCTTAGCACAGGGGAAGCTGAAGTCCGTGTCAGATTTGTTGGTTTTGGAGCTGAGGAAGATGAGTGGGTTAATATAAAAAAATCAGTGCGAGAACGCTCT ATTCCGTTGGAAAACTCAGAGTGTTCTACTTTGAAAGTTGGAGACCATGTCTTGTGCTTCCAGGAGAGGAGAGACCAGTCAATTTACTATGATGCTCACA TTGTAGAGATCCAAAGGAGAATACATGATATAAGAGGATGCAGGTGTCTCATCTTAATTCGGTATGCTCACGACAATACCGAGGAAAGTGTTCGATTGAG GAGACTTTGCCGCAGGCCGAGGCCGAGATCTTAGGTTAGGTGTATATGTTTGATGTGAAGATCATTGAGATTCCAGTTGGACAAGTTACCTATCAAGTTT ACAGCTACTGTTTGACATTTTGATAGTTGGTACTTCTATTTTTGAGTTTTTGACCTTCAATCTTTGATTGGAGTGTGAAAGAAGTGTAGAAGTTGAAAGG TCAAACGATTGTTAAGTTATTTTTCTAGTTGTAACTTGTAATCATGTTTTATATTCTATTTTTGATATTGTTCCATATACCTCACCATAATATTACCTCT ATGGCTGTATAATGCTTTAAAAACCGGATTGGATTTAAGTGTTTAATCAAAGGTTGAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_22941; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_186590
| Blastp | Protein SAWADEE HOMEODOMAIN HOMOLOG 2 from Arabidopsis with 61.94% of identity |
|---|---|
| Blastx | Protein SAWADEE HOMEODOMAIN HOMOLOG 2 from Arabidopsis with 61.79% of identity |
| Eggnog | HOX(ENOG410Y94E) |
| Kegg | Link to kegg annotations (AT3G18380) |
| CantataDB | Link to cantataDB annotations (CNT0001645) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438432.1) |
| Pfam | SAWADEE domain (PF16719.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |