Ll_transcript_186897

• Id Trinity: FTRINITY_DN51825_c0_g1_i1
• Name Transcript: Ll_transcript_186897
• Sequence: GGCTAAAGCACGGGAATAGTATTGTTAACACTTAACATCCACACCCACCGGTGCAATTTTTCAAATCTTTCTTTGAAATTGAAAAACCAAAACAAAGAAG ACACGACACATATGTAAATGAATGAATGAAAAAAGAGGTTTTGATTTTTGAAGAACACAAATACAATGTGTTTGTAACCTTTGTGAGGAATCGCAAGTGT TTATGTTTAAGAATGGAAGTAGAAGATGAGTGGGATTTGAGCACAGAAGAACTTGATTCTCTCGAAAGAGACGCTTTTCAAAAGATTGCTCAATTACGCA ATTCCCAATCTCAACCCCAACCTTCTCCTTCTCTTTCTTCTCAACCCCTTTCTACACCTTCTCCTACATACCCTAACCCTTTCCCAGATTCACGTCCACA AAAGGTTGAGAATTTGTCTCAAGGTGCTAGAGCATTACCCACGTCATCGAAATCAAAAGGGTCAAGCCAAGGTGTACCTTCAAAAGAATTGCCGAAGCTA TCGGTCAAATTTTTTCTTCATTCAAGTGGAAGTGTTGCAGCAAAATTTCAATATGAGCAGGTAGTAGTTGCTGCTTTTCGCAAAATCTCTAGAGCTTCAT GGAATGCAAAAGAAAGGTTATGGATGTTCCCTCTATCTTCTTTGTCAGAAGCAGAAAAGATACTTGGAGAAATATCTGGATACAATGTTCAGGTGGAGAA CATAGATCCCTTAGCACACCGGGCCATTACTGCTGCATCTGCTGTTCCAGATCTTCGAGATCGATATGACAAGATCCCTAGCTATGTCGAAACAAAGCTT TTGCCGTTTCAGCGAGATGGTGTCAGGTTTATATTGCAGCATGGAGGACGTGCTCTTTTAGCAGATGAAATGGGATTAGGGAAAACTTTGCAGGCTATTG CTGTAGCTGCATGCATTCAAGACTCGTGGCCTGTTCTCATAATTGCACCATCTTCTTTACGCTTGCAATGGGCTTCTATGATTCAACAATGGCTGAATAT TCCTTCATCCGATATACTTGTTGTCTTGTCTCAAAGTGGTGGATCAAATAGAGGAGGGTTCAATATAGTATCTTCAAGTGGTAAAAGCAGAATTCACCTG ACTGGACTGTTCAACATTATCTCATATGATTTGGTGCCAAAGCTACAAAATATGCTTATAGCATCAGACTTTAAGGTTGTGATTGCAGATGAATCACACT TTCTAAAAAATGCTCAGGCAAAAAGGACTGCTGCTTCTCTTCCGGTTATAAAGAAAGCTAAATATGCAATTTTGCTTAGTGGAACTCCTGCTTTATCCCG ACCAATTGAATTATTCAAGCAGTTGGAAGCCTTGTATCCTGATGTATACAAGAATGTTCATGAATATGGTAACCGATATTGCAAGGGTGGAGTCTTTGGT GTTTTTCAAGGTGCAAGTAACCATGATGAATTGCACAATTTGATGAAGGCAACAGTAATGATTCGTAGGCTTAAAAAGGATGTTCTTTCTGAACTTCCTG TGAAGCGCAGACAACAAGTTTTCCTAGACTTGGCTGACAAGGACATGAAGCAAATTAATTCTTTATTTCGTGAGCAAATTTTATCCAACATAGTGATCAG AGCTTCGTGCATCGAGCCGTCTTCTTCTTACATTGATGATAAGTTTCTTACCAAAATTATGTCATTTCACTTTGAAGTTGTAATATTTGTAGATTGAATT TGTATATTTAGTTGGAGGTGGTAAAGGCCAACCGATAAAGTTTTCCTTCAAAAATTGCAAAAAAAGTGTTGATTTTGTTTTGCAGTTGGAGATGGTTAAA GCCAAAATTAAGGAATCTAAATCAAAAGATGAGGCTGAATCACTTAAGTTCACTCAAAAGAATCTTATTAACAAGATATATACTGATTCTGCAGAGGCCA AGATTCCATCTGTTCTTGATTATGTTGGTACTGTGATTGAGGCAGGTTGCAAGTTTCTTATATTTGCACACCATCAGCCAATGATAGACTCGATACATGA GTTTCTTCTTAAGAAAAAAGTTGGTTGCATACGGATTGATGGGGGTACACCTGCTGCATCAAGGCAACAATTGGTGACAGAGTTCCAGGAAAAGGATGCC ATAAAGGCAGCAGTGTTATCTATTAAAGCAGGAGGAGTTGGGTTAACTTTAACTGCTGCAAGCACAGTCATCTTTGCAGAACTGTCCTGGACTCCAGGTG ACCTTATTCAGGCTGAAGACCGTGTTCATAGAATTGGCCAGGTGTCTTCTGTAAATATATACTACTTGCTGGCCAATGACACAGTTGATGACATCATCTG GGATGTAGTGCAAAGCAAACTGGAAAACTTGGGACAGATGTTAGATGGGCATGAGAACACCTTAGAGGTCTCAGCAAATCAACCAGAGAATTGCTCTGCA AAGCAAAAAACTCTTGACGAGTTTGTTAGAAGATGTGATGGCAGGGATGAGTTGGAACATCAGTCCAACCCCAAACGTTCTCGGCCCTGACCCCGGACTT CTTCAAAATGGTGCTCAAATGGGAAAACAATTGCATGTTGGCACTGAATTTTTGATGCCACGAGAAGGGCTTTTACAAGTGGATGTAGCTAAAAGAAATG GAACACTAAACTATGCTGCTGGTGCTGAGGTGATCTGGCTTCTGAAATATGTATTAGGTGAAAATAGTGATGAAGTCAACCAATTAGATTTTCGGTTTTA TCTACTAGTTGTCCCCTATAGTTGTTTTTGGGGCTTGTATTTTGTATAGATGACATTATCATATGTATGACACTTGCAAATTGCTTCACTCAATACAATG TTTTAGTATTGCTGTCAGAAATTGAGTCCGAGTATGATGCTATTTATTTTAGTTCTTTTGGGAAGAAAGTAAAGTACATAGAACTGAGGAGATTTGACTG GAAAAGAAAGCTCTCGCTGGTGGAAACAGTTGAATATTTGCAAAATTTACCTCTTAAATGGAATATTTTGCATTTTGTATTTAATGAAATTTGATTGTAC CAAATAATATTAACCACGTTGGTGTAAAAACATTTATAGTTTGAATTAATTAGATCTGCT
• Tissue: flowers
• Gene name: LI_gene_22990;
• Additional information: details;

Expression of Ll_transcript_186897

FPKM

• FPAB: 6
• FPNAB: 4
• LF1: 4.1
• LF2: 2.5
• LF3: 3.6
• LF4: 3.3
• UF1: 3.5
• UF2: 3.8
• UF3: 2.7
• UF4: 3.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_186897

• Blastp: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 from Homo with 40.38% of identity
• Blastx: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 from Homo with 40.38% of identity
• Eggnog: helicase(COG0553)
• Kegg: Link to kegg annotations (50485)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419023.1)
• Pfam: SNF2 family N-terminal domain (PF00176.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;