| Id Trinity | FTRINITY_DN51825_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_186903 |
| Sequence | ATTAATTCTTTATTTCGTGAGGTAATTCAACATATTCATTGTATTGTTTTAGACAAGGGTAACTTCATCCAAATTCTTTTAAGTTATTACTTGAGCTATT TATGCAATGTTGCTGCTATGACAATATTCTTTTGATTTATTTTATGACATACAGCATTACTCTGAGATACATTATATAAGATTGTTGAATTTAAACAAGT AAATTGATTTCCTTTGTTCGGAGTATTTGATGGCTGTTCAAAATTTAATATATTTTATTTAGCTTCTATTCTGTTAATAAATGAATTCTACTCTGTCTCC AGATAAGATTGAAAATTTATTTATTTTTTACTTATCAAATTGGTTAGCAAATTTTATCCAACATAGTGATCAGAGCTTCGTGCATCGAGCCGTCTTCTTC TTACATTGATGATAAGTTTCTTACCAAAATTATGTCATTTCACTTTGAAGTTGTAATATTTGTAGATTGAATTTGTATATTTAGTTGGAGGTGGTAAAGG CCAACCGATAAAGTTTTCCTTCAAAAATTGCAAAAAAAGTGTTGATTTTGTTTTGCAGTTGGAGATGGTTAAAGCCAAAATTAAGGAATCTAAATCAAAA GATGAGGCTGAATCACTTAAGTTCACTCAAAAGAATCTTATTAACAAGATATATACTGATTCTGCAGAGGCCAAGATTCCATCTGTTCTTGATTATGTTG GTACTGTGATTGAGGCAGGTTGCAAGTTTCTTATATTTGCACACCATCAGCCAATGATAGACTCGATACATGAGTTTCTTCTTAAGAAAAAAGTTGGTTG CATACGGATTGATGGGGGTACACCTGCTGCATCAAGGCAACAATTGGTGACAGAGTTCCAGGAAAAGGATGCCATAAAGGCAGCAGTGTTATCTATTAAA GCAGGAGGAGTTGGGTTAACTTTAACTGCTGCAAGCACAGTCATCTTTGCAGAACTGTCCTGGACTCCAGGTGACCTTATTCAGGCTGAAGACCGTGTTC ATAGAATTGGCCAGGTGTCTTCTGTAAATATATACTACTTGCTGGCCAATGACACAGTTGATGACATCATCTGGGATGTAGTGCAAAGCAAACTGGAAAA CTTGGGACAGATGTTAGATGGGCATGAGAACACCTTAGAGGTCTCAGCAAATCAACCAGAGAATTGCTCTGCAAAGCAAAAAACTCTTGACGAGTTTGTT AGAAGATGTGATGGCAGGGATGAGTTGGAACATCAGTCCAACCCCAAACGTTCTCGGCCCTGACCCCGGACTTCTTCAAAATGGTGCTCAAATGGGAAAA CAATTGCATGTTGGCACTGAATTTTTGATGCCACGAGAAGGGCTTTTACAAGTGGATGTAGCTAAAAGAAATGGAACACTAAACTATGCTGCTGGTGCTG AGGTGATCTGGCTTCTGAAATATGTATTAGGTGAAAATAGTGATGAAGTCAACCAATTAGATTTTCGGTTTTATCTACTAGTTGTCCCCTATAGTTGTTT TTGGGGCTTGTATTTTGTATAGATGACATTATCATATGTATGACACTTGCAAATTGCTTCACTCAATACAATGTTTTAGTATTGCTGTCAGAAATTGAGT CCGAGTATGATGCTATTTATTTTAGTTCTTTTGGGAAGAAAGTAAAGTACATAGAACTGAGGAGATTTGACTGGAAAAGAAAGCTCTCGCTGGTGGAAAC AGTTGAATATTTGCAAAATTTACCTCTTAAATGGAATATTTTGCATTTTGTATTTAATGAAATTTGATTGTACCAAATAATATTAACCACGTTGGTGTAA AAACATTTATAGTTTGAATTAATTAGATCTGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_22990; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_186903
| Blastp | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 from Xenopus with 53.94% of identity |
|---|---|
| Blastx | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 from Xenopus with 53.94% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (734728) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419020.1) |
| Pfam | Helicase conserved C-terminal domain (PF00271.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |