| Id Trinity | FTRINITY_DN51825_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_186905 |
| Sequence | GGCTAAAGCACGGGAATAGTATTGTTAACACTTAACATCCACACCCACCGGTGCAATTTTTCAAATCTTTCTTTGAAATTGAAAAACCAAAACAAAGAAG ACACGACACATATGTAAATGAATGAATGAAAAAAGAGGTTTTGATTTTTGAAGAACACAAATACAATGTGTTTGTAACCTTTGTGAGGAATCGCAAGTGT TTATGTTTAAGAATGGAAGTAGAAGATGAGTGGGATTTGAGCACAGAAGAACTTGATTCTCTCGAAAGAGACGCTTTTCAAAAGATTGCTCAATTACGCA ATTCCCAATCTCAACCCCAACCTTCTCCTTCTCTTTCTTCTCAACCCCTTTCTACACCTTCTCCTACATACCCTAACCCTTTCCCAGATTCACGTCCACA AAAGGTTGAGAATTTGTCTCAAGGTGCTAGAGCATTACCCACGTCATCGAAATCAAAAGGGTCAAGCCAAGGTGTACCTTCAAAAGAATTGCCGAAGCTA TCGGTCAAATTTTTTCTTCATTCAAGTGGAAGTGTTGCAGCAAAATTTCAATATGAGCAGGTAGTAGTTGCTGCTTTTCGCAAAATCTCTAGAGCTTCAT GGAATGCAAAAGAAAGGTTATGGATGTTCCCTCTATCTTCTTTGTCAGAAGCAGAAAAGATACTTGGAGAAATATCTGGATACAATGTTCAGGTGGAGAA CATAGATCCCTTAGCACACCGGGCCATTACTGCTGCATCTGCTGTTCCAGATCTTCGAGATCGATATGACAAGATCCCTAGCTATGTCGAAACAAAGCTT TTGCCGTTTCAGCGAGATGGTGTCAGGTTTATATTGCAGCATGGAGGACGTGCTCTTTTAGCAGATGAAATGGGATTAGGGAAAACTTTGCAGGCTATTG CTGTAGCTGCATGCATTCAAGACTCGTGGCCTGTTCTCATAATTGCACCATCTTCTTTACGCTTGCAATGGGCTTCTATGATTCAACAATGGCTGAATAT TCCTTCATCCGATATACTTGTTGTCTTGTCTCAAAGTGGTGGATCAAATAGAGGAGGGTTCAATATAGTATCTTCAAGTGGTAAAAGCAGAATTCACCTG ACTGGACTGTTCAACATTATCTCATATGATTTGGTGCCAAAGCTACAAAATATGCTTATAGCATCAGACTTTAAGGTTGTGATTGCAGATGAATCACACT TTCTAAAAAATGCTCAGGCAAAAAGGACTGCTGCTTCTCTTCCGGTTATAAAGAAAGCTAAATATGCAATTTTGCTTAGTGGAACTCCTGCTTTATCCCG ACCAATTGAATTATTCAAGCAGTTGGAAGCCTTGTATCCTGATGTATACAAGAATGTTCATGAATATGGTAACCGATATTGCAAGGGTGGAGTCTTTGGT GTTTTTCAAGGTGCAAGTAACCATGATGAATTGCACAATTTGATGAAGGCAACAGTAATGATTCGTAGGCTTAAAAAGGATGTTCTTTCTGAACTTCCTG TGAAGCGCAGACAACAAGTTTTCCTAGACTTGGCTGACAAGGACATGAAGCAAATTAATTCTTTATTTCGTGAGTTGGAGATGGTTAAAGCCAAAATTAA GGAATCTAAATCAAAAGATGAGGCTGAATCACTTAAGTTCACTCAAAAGAATCTTATTAACAAGATATATACTGATTCTGCAGAGGCCAAGATTCCATCT GTTCTTGATTATGTTGGTACTGTGATTGAGGCAGGTTGCAAGTTTCTTATATTTGCACACCATCAGCCAATGATAGACTCGATACATGAGTTTCTTCTTA AGAAAAAAGTTGGTTGCATACGGATTGATGGGGGTACACCTGCTGCATCAAGGCAACAATTGGTGACAGAGTTCCAGGAAAAGGATGCCATAAAGGCAGC AGTGGTATTGTATTTTCCTTCATGTAATTTCCTTGTAATTACTTTTATGTTTTCTCTAGTGTAAAATATGATTCAATTTTGAGATAATAATTTCCTGTTC ACATGTTTTTCCAGTTATCTATTAAAGCAGGAGGAGTTGGGTTAACTTTAACTGCTGCAAGCACAGTCATCTTTGCAGAACTGTCCTGGACTCCAGGTGA CCTTATTCAGGCTGAAGACCGTGTTCATAGAATTGGCCAGGTGTCTTCTGTAAATATATACTACTTGCTGGCCAATGACACAGTTGATGACATCATCTGG GATGTAGTGCAAAGCAAACTGGAAAACTTGGGACAGATGTTAGATGGGCATGAGAACACCTTAGAGGTCTCAGCAAATCAACCAGAGAATTGCTCTGCAA AGCAAAAAACTCTTGACGAGTTTGTTAGAAGATGTGATGGCAGGGATGAGTTGGAACATCAGTCCAACCCCAAACGTTCTCGGCCCTGACCCCGGACTTC TTCAAAATGGTGCTCAAATGGGAAAACAATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_22990; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_186905
| Blastp | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 from Homo with 38.85% of identity |
|---|---|
| Blastx | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 from Danio with 36.98% of identity |
| Eggnog | helicase(COG0553) |
| Kegg | Link to kegg annotations (50485) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419023.1) |
| Pfam | SNF2 family N-terminal domain (PF00176.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |