Ll_transcript_186906

• Id Trinity: FTRINITY_DN51825_c0_g1_i8
• Name Transcript: Ll_transcript_186906
• Sequence: ATTAATTCTTTATTTCGTGAGGTAATTCAACATATTCATTGTATTGTTTTAGACAAGGGTAACTTCATCCAAATTCTTTTAAGTTATTACTTGAGCTATT TATGCAATGTTGCTGCTATGACAATATTCTTTTGATTTATTTTATGACATACAGCATTACTCTGAGATACATTATATAAGATTGTTGAATTTAAACAAGT AAATTGATTTCCTTTGTTCGGAGTATTTGATGGCTGTTCAAAATTTAATATATTTTATTTAGCTTCTATTCTGTTAATAAATGAATTCTACTCTGTCTCC AGATAAGATTGAAAATTTATTTATTTTTTACTTATCAAATTGGTTAGCAAATTTTATCCAACATAGTGATCAGAGCTTCGTGCATCGAGCCGTCTTCTTC TTACATTGATGATAAGTTTCTTACCAAAATTATGTCATTTCACTTTGAAGTTGTAATATTTGTAGATTGAATTTGTATATTTAGTTGGAGGTGGTAAAGG CCAACCGATAAAGTTTTCCTTCAAAAATTGCAAAAAAAGTGTTGATTTTGTTTTGCAGTTGGAGATGGTTAAAGCCAAAATTAAGGAATCTAAATCAAAA GATGAGGCTGAATCACTTAAGTTCACTCAAAAGAATCTTATTAACAAGAGGCCAAGATTCCATCTGTTCTTGATTATGTTGGTACTGTGATTGAGGCAGG TTGCAAGTTTCTTATATTTGCACACCATCAGCCAATGATAGACTCGATACATGAGTTTCTTCTTAAGAAAAAAGTTGGTTGCATACGGATTGATGGGGGT ACACCTGCTGCATCAAGGCAACAATTGGTGACAGAGTTCCAGGAAAAGGATGCCATAAAGGCAGCAGTGTTATCTATTAAAGCAGGAGGAGTTGGGTTAA CTTTAACTGCTGCAAGCACAGTCATCTTTGCAGAACTGTCCTGGACTCCAGGTGACCTTATTCAGGCTGAAGACCGTGTTCATAGAATTGGCCAGGTGTC TTCTGTAAATATATACTACTTGCTGGCCAATGACACAGTTGATGACATCATCTGGGATGTAGTGCAAAGCAAACTGGAAAACTTGGGACAGATGTTAGAT GGGCATGAGAACACCTTAGAGGTCTCAGCAAATCAACCAGAGAATTGCTCTGCAAAGCAAAAAACTCTTGACGAGTTTGTTAGAAGATGTGATGGCAGGG ATGAGTTGGAACATCAGTCCAACCCCAAACGTTCTCGGCCCTGACCCCGGACTTCTTCAAAATGGTGCTCAAATGGGAAAACAATTGCATGTTGGCACTG AATTTTTGATGCCACGAGAAGGGCTTTTACAAGTGGATGTAGCTAAAAGAAATGGAACACTAAACTATGCTGCTGGTGCTGAGGTGATCTGGCTTCTGAA ATATGTATTAGGTGAAAATAGTGATGAAGTCAACCAATTAGATTTTCGGTTTTATCTACTAGTTGTCCCCTATAGTTGTTTTTGGGGCTTGTATTTTGTA TAGATGACATTATCATATGTATGACACTTGCAAATTGCTTCACTCAATACAATGTTTTAGTATTGCTGTCAGAAATTGAGTCCGAGTATGATGCTATTTA TTTTAGTTCTTTTGGGAAGAAAGTAAAGTACATAGAACTGAGGAGATTTGACTGGAAAAGAAAGCTCTCGCTGGTGGAAACAGTTGAATATTTGCAAAAT TTACCTCTTAAATGGAATATTTTGCATTTTGTATTTAATGAAATTTGATTGTACCAAATAATATTAACCACGTTGGTGTAAAAACATTTATAGTTTGAAT TAATTAGATCTGCT
• Tissue: flowers
• Gene name: LI_gene_22990;
• Additional information: details;

Expression of Ll_transcript_186906

FPKM

• FPAB: 0.2
• FPNAB: 0.1
• LF1: 0
• LF2: 0.8
• LF3: 0.2
• LF4: 0.3
• UF1: 0.2
• UF2: 0.2
• UF3: 0.6
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_186906

• Blastp: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 homolog from Caenorhabditis with 54.17% of identity
• Blastx: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 from Xenopus with 48.45% of identity
• Eggnog: helicase(COG0553)
• Kegg: Link to kegg annotations (CELE_C16A3.1)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419020.1)
• Pfam: Helicase conserved C-terminal domain (PF00271.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;