| Id Trinity | FTRINITY_DN51847_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_186812 |
| Sequence | AAAGGATGAATTACGAGTTTTCAGTGAAACAATTGAATCTCTTCTTAGTACAACATCTTCTGATGGAGCTGCAATTTTGAGAGTTTTGCAAGCCTTGAGC TCCCTTTTGACATCATTGACTGAGAAGGAGAGTGATGGAATAACTCTCAATCTTTCTGACGTTTGGGAGATTAATTTAGCATTAGAGCCCTTGTGGCATG AGCTAAGCTGTTGCATAAGCAAGATAGAGTCCTACTCTGAGCCTGCATCTGAGCTTTTAACCCCTTCTAGAACACTGGTGCCTAAACCATCTGGTGTCAT GTCTCCACTTCCAGCTGGTTCTCAAAATATCTTACCATACATAGAATCTTTCTTTGTGGTTTGTGAGAAGCTGCATCCCGCACAGTCTGGTGCTGCTCAG GGTTCCAGTGTTCCTTTTACTTCTGATGTTGAAGAGGCCAGCACATCTGCTACACAGCAGAAAACATCTGGACCTGCTGTTAAAGTAGACGAGAAACAAT CTGCTTTTATAAAATTTTCAGAGAAGCATAGGAAGCTATTAAATACTTTTATCAGGCAAAACCCAGGTTTGCTTGAGAAATCTTTCTCCCTCATGCTGAA AATTCCGAGATTTATTGATTTTGATAACAAGCGTTCCCACTTCCGATCAAAAATTAAGCATCAGCATGACCATCACCATAGCGCATTAAGAATACCAGTA AGAAGAGCGTATGTTCTGGAAGATTCTTACAACCAGCTTCGGATGAGATCGGCTCAAGATTTGAAGGGAAGGTTGAATGTTCACTTCCGAGGGGAGGAGG GCATTGATGCAGGCGGGCTTACAAGGGAATGGTATCAATTGTTGTCTAGAGTTATTTTTGACAAAGGAGCACTGCTATTTACTACAGTAGGCAATGATTT GACATTTCAGCCAAACCCAAACTCTGTTTACCAAACAGAACATCTATCTTATTTTAAATTTGTTGGTAGAGTGGTTGGAAAAGCATTATTTGATGGTCAG CTCTTGGATGTCCATTTTACTCGGTCATTCTACAAGCACATTCTCGGGGCCAAAGTTACATATCATGATATTGAAGCCATTGATCCAGACTATTTCAAAA ATTTGAAATGGTTGCTTGAGAATGATATCAGCGATGTTCTGGGTCTTACTTTTAGCATCGACGCAGATGAGGAAAAATTGATCTTATATGAACGAACAGA AGTAACTGATTATGAGTTGATTCCCGGTGGACGTAATATCAGAGTTACTGAGGAGAACAAGCATCAATATGTTGATTTGGTTGCAGAGCATCGGTTGACA ACTTCTATTCGACCACAAATAAATGCTTTCTTGGAAGGGTTCAATGAATTAATTCCCAGGGAGTTCATATCCATTTTCAATGACAAGGAGTTTGAATTAT TGATAAGTGGACTTCCTGATATTGATTTGGATGACTTGAGAGCAAATACAGAATATTCTGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_23029; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_186812
| Blastp | E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 67.68% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 69.13% of identity |
| Eggnog | ubiquitin protein ligase(COG5021) |
| Kegg | Link to kegg annotations (AT1G55860) |
| CantataDB | Link to cantataDB annotations (CNT0001834) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414794.1) |
| Pfam | HECT-domain (ubiquitin-transferase) (PF00632.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |