Ll_transcript_186824

• Id Trinity: FTRINITY_DN51847_c0_g1_i10
• Name Transcript: Ll_transcript_186824
• Sequence: AAAGGATGAATTACGAGTTTTCAGTGAAACAATTGAATCTCTTCTTAGTACAACATCTTCTGATGGAGCTGCAATTTTGAGAGTTTTGCAAGCCTTGAGC TCCCTTTTGACATCATTGACTGAGAAGGAGAGTGATGGAATAACTCTCAATCTTTCTGACGTTTGGGAGATTAATTTAGCATTAGAGCCCTTGTGGCATG AGCTAAGCTGTTGCATAAGCAAGATAGAGTCCTACTCTGAGCCTGCATCTGAGCTTTTAACCCCTTCTAGAACACTGGTGCCTAAACCATCTGGTGTCAT GTCTCCACTTCCAGCTGGTTCTCAAAATATCTTACCATACATAGAATCTTTCTTTGTGGTTTGTGAGAAGCTGCATCCCGCACAGTCTGGTGCTGCTCAG GGTTCCAGTGTTCCTTTTACTTCTGATGTTGAAGAGGCCAGCACATCTGCTACACAGCAGAAAACATCTGGACCTGCTGTTAAAGTAGACGAGAAACAAT CTGCTTTTATAAAATTTTCAGAGAAGCATAGGAAGCTATTAAATACTTTTATCAGGCAAAACCCAGGTTTGCTTGAGAAATCTTTCTCCCTCATGCTGAA AATTCCGAGATTTATTGATTTTGATAACAAGCGTTCCCACTTCCGATCAAAAATTAAGCATCAGCATGACCATCACCATAGCGCATTAAGAATACCAGTA AGAAGAGCGTATGTTCTGGAAGATTCTTACAACCAGCTTCGGATGAGATCGGCTCAAGATTTGAAGGGAAGGTTGAATGTTCACTTCCGAGGGGAGGAGG GCATTGATGCAGGCGGGCTTACAAGGGAATGGTATCAATTGTTGTCTAGAGTTATTTTTGACAAAGGAGCACTGCTATTTACTACAGTAGGCAATGATTT GACATTTCAGCCAAACCCAAACTCTGTTTACCAAACAGAACATCTATCTTATTTTAAATTTGTTGGTAGAGTGGTTGGAAAAGCATTATTTGATGGTCAG CTCTTGGATGTCCATTTTACTCGGTCATTCTACAAGCACATTCTCGGGGCCAAAGTTACATATCATGATATTGAAGCCATTGATCCTGACTACTTCAAAA ATTTGAAATGGATGCTTGAGAATGATATCACTGATGTTCTGGATCTTACTTTTAGCATTGATGCAGATGAGGAAAAGTTGATCTTATATGAAAGGACAGA AGTATTGACCTTGTTCTGAAGCCTTCTGAGTTTATATTGATGTATTAGATTGCAAGTTATTTTTGTCTAATTTTGATGAACATGTCTAGGTGACTGATTA TGAGTTGATTCC
• Tissue: flowers
• Gene name: LI_gene_23029;
• Additional information: details;

Expression of Ll_transcript_186824

FPKM

• FPAB: 8.7
• FPNAB: 8.8
• LF1: 5
• LF2: 4.8
• LF3: 5.5
• LF4: 5.5
• UF1: 4.2
• UF2: 4.3
• UF3: 5.1
• UF4: 4.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_186824

• Blastp: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 64.13% of identity
• Blastx: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 65.72% of identity
• Eggnog: ubiquitin protein ligase(COG5021)
• Kegg: Link to kegg annotations (AT1G55860)
• CantataDB: Link to cantataDB annotations (CNT0001834)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414794.1)
• Pfam: HECT-domain (ubiquitin-transferase) (PF00632.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;