Ll_transcript_186813

Id TrinityFTRINITY_DN51847_c0_g1_i2
Name TranscriptLl_transcript_186813
SequenceCGAGCACAGAGGCTACATCAATCTCAGGAGTTGGAAGGTCAACCTGTTGAAATGGATACAGTCTCAATAATTGCAACATTTCCTTCAGAAATACGAGAAG AGGTTCTCTTAACATCATCTGATGCTGTCCTTGCTAACCTTACACCAGCTCTTGTCGCTGAGGCAAATATGTTGCGGGAGAGGTTTGCTCATCGATACAG TCGTAACCTCTTTGGTATGAATTCCAGAAGCCGCAGAGGTGAGACTTCTAGGCGTGAAGCTATCATTGGCCTGGATGGAGCAGGGGGGAGCATTTCTTCA CGCAGGTCTGGTGGAGCTAAGGTTGTTGAAGCTGATGGAGCACCTCTAGTTGACACCGAAGCTTTGCATGCTATGATTCGGTTGTTTCGCATAGTTCAGC CACTATATAAAGGTCAATTGCAAAGGCTTCTTTTGAATCTTTGTGCCCATAGTGAAACCAGAACTTCTCTGGTGAAGATTCTGATGGACTTGATAATGCT TGATGTAAGAAAGCCGTCCAGTTATTTTAGTAAAATTGAACCTCCATACAGACTATATGGTTGTCAGAACAATGTGATGTACTCGCGTCCTCAATCTTTT GATGGAGTTCCCCCATTGCTCTCTCGGCGAATACTTGAAACTCTCACTTATCTCGCACGTAATCATCCGTATGTGGCCAAAAATTTGCTTCAGTTTAGGC TGCATCATCCTGCATCAAGAGAGCCAGATAATGCTGATGTTGCACGAGGCAAAGCTGTGATGGTTGTTGAAGATGAAGGAAATACAGGTGGTAGCAATGC AGGATGTGTATCCATAACAATACTTTTGAGTCTCTTGAAGCATCCCCTCTATTTGAGGAGCATAGCCCATCTTGAGCAGTTGCTAAATTTATTAGATGCT ATCATAGATAGTGCTGGAAGCAAGTCTAGTTCATCCGACAAATCCCAGATATCTACTGAACCGGAATCTGTTCCAGAAACTCCTGTGATGGAGGCTGCTA TAAATACAGATTATGTTGTTATTTCTTCTGGTCTTGATGCATCTCCTAAAGTTGATGATTCATCCAAACCCACTTCCTCTGGTAATAGGGAAAGTGAGAC AGAGCAGGTGCTGAGTAACCTGCCACAAGCAGAACTTCGACTCTTGTGCTCATTGCTTGCACTAGAAGGTTTGTCAGATAATGCATATGTTATTGTCGCG GAGGTAATGAAGAAATTGGTGGCCATTGCTCCAACTCATTGTCAGCTGTTTGTCACTGAGCTGGCAGCAGCAGTTCAGAAGTTGACTTCATCTGCAAAGG ATGAATTACATGTTTTCAGCGAAACAATTGAAGCTCTTCTTAGTACAACATCTTCTGATGGAGCTGCGATTTTGAGAGTATTGCAAGCCTTGAGCTCCCT TTTGACCTCATCGACTGAGAAAAAGTGTGATGGAAAAATTCCTGATCTTTCTGAGGTTTGGGAGATAAATTCAGCATTGGAACCCTTGTGGCTTGAGCTA AGCTATTGCATAAGCAAAATAGAGTCTTACTCTGAATCTGCATCTGAGCTTTTGACCCCTTCTAGAACACTTGTATCTAAACCGTCTGGTGCCACGCCTC CACTTCCAGCTGGTTCTCAAAATATCTTACCATATATAGAATCTTTCTTTGTTGTTTGTGAGAAGCTACATCCTGCACAATCAGGTGCTACTCATGGTTC CCGTGTTCCTGTTAATTCTGATGTTGAAGAGGCCAGCACATCTGCTACACAGCAAAAAACATCTGGACCTGCTGTGAACGTAGACGAGAAACATGCTGCT TTTGTCAAGTTTTCAGAGAAGCATAGGAAGCTATTAAATACTTTTATCAGGCAAAACCCAGGTTTGCTTGAGAAATCTTTCTCTCTTATGCTGAAGGTTC CAAGATTTATTGATTTTGATAACAAGCGTTCCCACTTCCGATCAAAAATTAAGCATCAGCACGATCATCACCATGGTCCATTAAGAATATCAGTAAGAAG GGCGTATGTTCTAGAAGATTCTTACAATCAGCTTCGGATGAGACCGACCCAAGATTTGAAGGGAAGGTTGAATGTTCAGTTCCAAGGGGAGGAGGGTATT GATGCAGGTGGACTTACAAGGGAATGGTATCAATTGTTGTCTAGAGTTATTTTTGACAAAGGAGCACTGCTCTTTACTACAGTGGGCAATGAGTTGACAT TTCAGCCAAACCCAAATTCTGTTTACCAAACAGAACATCTATCTTACTTCAAATTTGTTGGTAGAGTGGTTGGAAAAGCATTATTTGATGGTCAGCTCTT GGATGTCCATTTTACTCGGTCATTCTACAAGCATATTCTAGGGGCCAAAGTTACATATCATGATATTGAAGCCATAGATCCAGACTACTTCAAAAATTTG AAATGGATGCTTGAGAATGATATTAGCGATGTTCTGGGTCTTACTTTTAGCATCGACGCAGATGAGGAAAAATTGATCTTATATGAACGAACAGAAGTTA CTGATTATGAGTTGATTCCCGGTGGGCGTAATATCAAAGTTACCGAGGAGAACAAGCATCAATATGTTGATTTGGTCGCAGAGCATCGGTTGACAACTGC TATTCGACCTCAAATAAATGCTTTCCTGGAAGGGTTCAGTGAGTTAATACCCAGAGAGTTGATATCTATATTCAATGACAAAGAACTGGAATTATTGATC GGTGGACTTCCTGAAATTGACTTGGATGACTTAAGAGCAAATACAGAATATTCTGGATATAGTGTTGCATCACCCGTTATCCAATGGTTTTGGGAAGTTG TTCAAGCTTTGAGCAAAGAAGACAAGGCTAGACTATTGCAGTTTGTGACCGGCACATCCAAGGTTCCTTTGGAGGGTTTTAGTGCTCTTCAAGGAATTTC TGGCTCCCAGAAGTTTCAGATACACAAGGCATATGGAAG BLAST
Tissueflowers
Gene nameLI_gene_23029; 
Additional informationdetails; 

Expression of Ll_transcript_186813

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_186813
BlastpE3 ubiquitin-protein ligase UPL2 from Arabidopsis with 55.78% of identity
BlastxE3 ubiquitin-protein ligase UPL2 from Arabidopsis with 55.29% of identity
Eggnogubiquitin protein ligase(COG5021)
KeggLink to kegg annotations (AT1G70320)
CantataDBLink to cantataDB annotations (CNT0001834)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019416613.1)
PfamHECT-domain (ubiquitin-transferase) (PF00632.24)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;