Ll_transcript_186816

• Id Trinity: FTRINITY_DN51847_c0_g1_i4
• Name Transcript: Ll_transcript_186816
• Sequence: CGAGCACAGAGGCTACATCAATCTCAGGAGTTGGAAGGTCAACCTGTTGAAATGGATACAGTCTCAATAATTGCAACATTTCCTTCAGAAATACGAGAAG AGGTTCTCTTAACATCATCTGATGCTGTCCTTGCTAACCTTACACCAGCTCTTGTCGCTGAGGCAAATATGTTGCGGGAGAGGTTTGCTCATCGATACAG TCGTAACCTCTTTGGTATGAATTCCAGAAGCCGCAGAGGTGAGACTTCTAGGCGTGAAGCTATCATTGGCCTGGATGGAGCAGGGGGGAGCATTTCTTCA CGCAGGTCTGGTGGAGCTAAGGTTGTTGAAGCTGATGGAGCACCTCTAGTTGACACCGAAGCTTTGCATGCTATGATTCGGTTGTTTCGCATAGTTCAGC CACTATATAAAGGTCAATTGCAAAGGCTTCTTTTGAATCTTTGTGCCCATAGTGAAACCAGAACTTCTCTGGTGAAGATTCTGATGGACTTGATAATGCT TGATGTAAGAAAGCCGTCCAGTTATTTTAGTAAAATTGAACCTCCATACAGACTATATGGTTGTCAGAACAATGTGATGTACTCGCGTCCTCAATCTTTT GATGGAGTTCCCCCATTGCTCTCTCGGCGAATACTTGAAACTCTCACTTATCTCGCACGTAATCATCCGTATGTGGCCAAAAATTTGCTTCAGTTTAGGC TGCATCATCCTGCATCAAGAGAGCCAGATAATGCTGATGTTGCACGAGGCAAAGCTGTGATGGTTGTTGAAGATGAAGGAAATACAGGTGGTAGCAATGC AGGATGTGTATCCATAACAATACTTTTGAGTCTCTTGAAGCATCCCCTCTATTTGAGGAGCATAGCCCATCTTGAGCAGTTGCTAAATTTATTAGATGCT ATCATAGATAGTGCTGGAAGCAAGTCTAGTTCATCCGACAAATCCCAGATATCTACTGAACCGGAATCTGTTCCAGAAACTCCTGTGATGGAGGCTGCTA TAAATACAGATTATGTTGTTATTTCTTCTGGTCTTGATGCATCTCCTAAAGTTGATGATTCATCCAAACCCACTTCCTCTGGTAATAGGGAAAGTGAGAC AGAGCAGGTGCTGAGTAACCTGCCACAAGCAGAACTTCGACTCTTGTGCTCATTGCTTGCACTAGAAGGTTTGTCAGATAATGCATATGTTATTGTCGCG GAGGTAATGAAGAAATTGGTGGCCATTGCTCCAACTCATTGTCAGCTGTTTGTCACTGAGCTGGCAGCAGCAGTTCAGAAGTTGACTTCATCTGCAAAGG ATGAATTACATGTTTTCAGCGAAACAATTGAAGCTCTTCTTAGTACAACATCTTCTGATGGAGCTGCGATTTTGAGAGTATTGCAAGCCTTGAGCTCCCT TTTGACCTCATCGACTGAGAAAAAGTGTGATGGAAAAATTCCTGATCTTTCTGAGGTTTGGGAGATAAATTCAGCATTGGAACCCTTGTGGCTTGAGCTA AGCTATTGCATAAGCAAAATAGAGTCTTACTCTGAATCTGCATCTGAGCTTTTGACCCCTTCTAGAACACTTGTATCTAAACCGTCTGGTGCCACGCCTC CACTTCCAGCTGGTTCTCAAAATATCTTACCATATATAGAATCTTTCTTTGTTGTTTGTGAGAAGCTACATCCTGCACAATCAGGTGCTACTCATGGTTC CCGTGTTCCTGTTAATTCTGATGTTGAAGAGGCCAGCACATCTGCTACACAGCAAAAAACATCTGGACCTGCTGTGAACGTAGACGAGAAACATGCTGCT TTTGTCAAGTTTTCAGAGAAGCATAGGAAGCTATTAAATACTTTTATCAGGCAAAACCCAGGTTTGCTTGAGAAATCTTTCTCTCTTATGCTGAAGGTTC CAAGATTTATTGATTTTGATAACAAGCGTTCCCACTTCCGATCAAAAATTAAGCATCAGCACGATCATCACCATGGTCCATTAAGAATATCAGTAAGAAG GGCGTATGTTCTAGAAGATTCTTACAATCAGCTTCGGATGAGACCGACCCAAGATTTGAAGGGAAGGTTGAATGTTCAGTTCCAAGGGGAGGAGGGTATT GATGCAGGTGGACTTACAAGGGAATGGTATCAATTGTTGTCTAGAGTTATTTTTGACAAAGGAGCACTGCTCTTTACTACAGTGGGCAATGAGTTGACAT TTCAGCCAAACCCAAATTCTGTTTACCAAACAGAACATCTATCTTACTTCAAATTTGTTGGTAGAGTGGTTGGAAAAGCATTATTTGATGGTCAGCTCTT GGATGTCCATTTTACTCGGTCATTCTACAAGCATATTCTAGGGGCCAAAGTTACATATCATGATATTGAAGCCATAGATCCAGACTACTTCAAAAATTTG AAATGGATGCTTGAGAATGATATCACTGATGTTCTGGATCTTACTTTTAGCATTGATGCAGATGAGGAAAAGTTGATCTTATATGAAAGGACAGAAGTAT TGACCTTGTTCTGAAGCCTTCTGAGTTTATATTGATGTATTAGATTGCAAGTTATTTTTGTCTAATTTTGATGAACATGTCTAGGTGACTGATTATGAGT TGATTCCCGGTGGGCGGATTATCAAGGTTACAGAGGAGAATAAGAGTCAATATGTGGATCTGGTTGCCGAGCATCGGTTGACGACTGCTATTCGACCTCA AATAAATGCTTTCCTGGAAGGGTTCAGTGAGTTAATACCCAGAGAGTTGATATCTATATTCAATGACAAAGAACTGGAATTATTGATCGGTGGACTTCCT GAAATTGACTTGGATGACTTAAGAGCAAATACAGAATATTCTGGATATAGTGTTGCATCACCCGTTATCCAATGGTTTTGGGAAGTTGTTCAAGCTTTGA GCAAAGAAGACAAGGCTAGACTATTGCAGTTTGTGACCGGCACATCCAAGGTTCCTTTGGAGGGTTTTAGTGCTCTTCAAGGAATTTCTGGCTCCCAGAA GTTTCAGATACACAAGGCATATGGAAG
• Tissue: flowers
• Gene name: LI_gene_23029;
• Additional information: details;

Expression of Ll_transcript_186816

FPKM

• FPAB: 3.8
• FPNAB: 3.6
• LF1: 2.7
• LF2: 4.5
• LF3: 4.4
• LF4: 3.1
• UF1: 1.3
• UF2: 2.9
• UF3: 2.3
• UF4: 1.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_186816

• Blastp: E3 ubiquitin-protein ligase UPL2 from Arabidopsis with 51.28% of identity
• Blastx: E3 ubiquitin-protein ligase UPL2 from Arabidopsis with 50.7% of identity
• Eggnog: ubiquitin protein ligase(COG5021)
• Kegg: Link to kegg annotations (AT1G70320)
• CantataDB: Link to cantataDB annotations (CNT0001834)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416613.1)
• Pfam: HECT-domain (ubiquitin-transferase) (PF00632.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;