Ll_transcript_144523

Id TrinityFTRINITY_DN51917_c0_g1_i12
Name TranscriptLl_transcript_144523
SequenceATTTTAAAAAATAATAAATCAGTAGTTTATTTGAAAAGAGAAAACTCCATAACTGAAACAAGAAATGGATTCTAGGGTTTGGTGAAGCGCAACGCAGAGA GTGAAGAAATGTCGTCACAGTTCTGGAAACCAGGTACCGAAAAGCCTCGTATATTAGAAGACGAAGAAGGTTCCGTTATCTTCTTATCCAATTCGCTATC ATCATCTTCTTATTCTGAGAAACAGAGGCAGCGATTACCTGTGTTCAAGTATCGCAATGCAATTCTATACCTAGTTGAGACTCATGGAACTACAATAATA GTTGGTGAGACAGGGAGTGGTAAAAGCACTCAAATTCCTCAGTACCTCATAGAAGCAGGTTGGGGCCACGGTGGCCGTCTCATCGGTTGTACTCAACCGC GGCGTCTCGCGGTTCAGGCCGTTGCGTCTCGGGTTGCGCAAGAGATGGGAGTGCAATTGGGTGAAGAAGTTGGTTACACTATTCGCTTTGAAGATGTTAC AAAATCAGTCAGCATCTCTCACTATATACATTTTTTTAATGTTAATTTAGATTCTCCAAATATTATTGATAACAGTGACACTGTTCGCTTTGTTTGGCAT GAAATTAGTTTATAACAGTGATATTGTAGCTTATTGCTGTGAATTATCTAAAAAGTGTGAGATTGTAGTTAAAGCTTATGACAGATTGAAGAGTGCTTTG CAAAACTAGCTGATTCAATTAAAGTTTGCAAAAATCAATTGTATTGGGGATAAAAATTGTCACGTGATGAAAGATTATGGGGGCGGGTGCAGGATGTGAC TGTACTGAAATTTTTAACTGATGGGGTTCTACTAAGGGAGATGATGGATGATCCTCTTTTGACCAAATATAGTGTCATAATGGTAGATGAAGCTCATGAA AGGTCAATTTCAACTGACATTTTACTTGGACTATTGAAAAAGATTCAACGACGTCGACCAGAGTTGCGTTTGATTATAGCTTCTGCTACTATTGAAGCAA AGTCAATGTCTGACTTCTTCAGAACTAGAAAAAAGCGCCGAGAACCTGAAAATGAGGACAGTCGACTGCAATTGGAACCTGCAATCTTATCAGTCGAGGG TAGAAGCTTCAATGTGCAAATTAATTATGCTGAGGAACCTGTCCACGACTATGTTCAAGCTGTTGTTTCAACAGTACTCTCGATTCATGAAAGGGAGTCC ACAGGAGATGTTCTAGTCTTTCTTACTGGCCAAGATGATATTGATGCTGCTATTCATTTACTTAATGAAGAAGTTCAAAATAATGGCAAACGATCTTCAG GGTTGGTTCTTTTGCCTCTGTATTCTGGACTTCCTCGTGCTGAACAGGAGTTAGTGTTTTCTCCAACTCCTAGAGGGAAAAGGAAAGTAGTAATTTCTAC TAATATAGCAGAAACATCACTCACACTGGAGGGCGTTGTGTATGTTGTTGACAGTGGATTCTCAAAACAGCGATTCTACAATCCGGTTTCTGATATCGAA AATCTGGTTGTGGCACCAATATCTAGAGCTTCTGCTAGGCAAAGAGCTGGTAGGGCTGGACGAGTTCGACCTGGAAAGTGTTACAGGCTATATACTGAAG AATATTTTCTAAATGAGATGCCTAATGATGGAATTCCAGAGATACAGAGATCAAATCTTGTCTCATGTGTAATCCAGTTGAAGGCCTTGGGAATTGATAA TATATTGGGCTTTGATTGGCCAGCATCTCCGTCTCCTGAAGCAATGATCCGAGCATTGGAAGTTCTTTACTCACTCGGGGTCTTGGATGATGATGCTAAG CTTACTTCACCAGTTGGATTTCAAGTTGCAGAGATTCCACTTGACCCAATGATCGCAAAAATGATAATAGCTTCCAACCAATTTGGGTGTTCAGAGGAAA TAATCACAATTGCTGCTGTTCTTTCCATTCAATCTATCTGGATCTCAGGGAGAGGGATACAAAAGGAATCAGATGAAGCTAAATTGAGATTTGCTGCTGC AGAGGGTGACCATGTAACATTCCTTAATGTATATAAGGGGTTTCTTCAGTCTAGTAAATCTTCACAGTGGTGTCACAAGAACTATGTGAACTACCAAGCG ATGAGAAAGGTTATTGAGGTTAGAGAACAACTCAAAAGAATTGCACATAGGATAGGCATAGTCTTAAAATCTTGCGAAAGTGATATGCAGGCTGTTAGAA AAGCAGTCACTTCTGGCTTTTTTGCTAATGCGTGCAGTCTAGAGCCATACAGTCATAATGGGATGTACAAGACGTTAAGAGGATCACAAGAAGTTTATAT TCACCCATCATCCGTGCTATTCAGGGTAAATCCAAAGTGGGTTATTTACAATTCTCTTGTATCAACTGACCGACAATACATGCGTAACGTCATAACTGTC GATCCCTCGTGGCTATTGGAGGCTGCTCCTCACTTCTATCAGTTACAGCAGTCTAATCCTCTTTTCTGATTCCCTTACCATTACTAATTGGAATAGATTG TTATCATATATCAACTCAGTTCAAGTGGATCAGAATTATGTACCTTTTGTTGCTTTTGAAGAGTGAGTTTCATCTCAATTATTACAAATTTATGACCAAG TCATTCCATAACACCTGCACCAAACTAACCACATTACTAACCAGTGTCTGTAATTGTCTCCTTCACAATTGGTATTTCATTTTTAAGGTTATGTATACAA TTTTCTGAAGTGAAAATGTTAAGCTTCAGTTATATCCCTATATATGTTTATAGATTGGTATGTGTTCTTGAATGCATGGAATAATAGGGGTACTTGTGTA TGACCCATAAAAGTTGAAAAACCAAATATTATTGCAGGATTTTGGATACTTAGCTTAAATATCCATGTACGATTTGTCACTAAATGTCACACCATTCAAC BLAST
Tissueflowers
Gene nameLI_gene_23243; 
Additional informationdetails; 

Expression of Ll_transcript_144523

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_144523
BlastpProbable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 78.44% of identity
BlastxProbable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 78.48% of identity
Eggnoghelicase(COG1643)
KeggLink to kegg annotations (AT4G18465)
CantataDBLink to cantataDB annotations (CNT0002241)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019440202.1)
PfamHelicase conserved C-terminal domain (PF00271.30)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;