Ll_transcript_144526

• Id Trinity: FTRINITY_DN51917_c0_g1_i15
• Name Transcript: Ll_transcript_144526
• Sequence: ATTTTAAAAAATAATAAATCAGTAGTTTATTTGAAAAGAGAAAACTCCATAACTGAAACAAGAAATGGATTCTAGGGTTTGGTGAAGCGCAACGCAGAGA GTGAAGAAATGTCGTCACAGTTCTGGAAACCAGGTACCGAAAAGCCTCGTATATTAGAAGACGAAGAAGGTTCCGTTATCTTCTTATCCAATTCGCTATC ATCATCTTCTTATTCTGAGAAACAGAGGCAGCGATTACCTGTGTTCAAGTATCGCAATGCAATTCTATACCTAGTTGAGACTCATGGAACTACAATAATA GTTGGTGAGACAGGGAGTGGTAAAAGCACTCAAATTCCTCAGTACCTCATAGAAGCAGGTTGGGGCCACGGTGGCCGTCTCATCGGTTGTACTCAACCGC GGCGTCTCGCGGTTCAGGCCGTTGCGTCTCGGGTTGCGCAAGAGATGGGAGTGCAATTGGGTGAAGAAGTTGGTTACACTATTCGCTTTGAAGATGTTAC AAAATCAGTCAGCATCTCTCACTATATACATTTTTTTAATGTTAATTTAGATTCTCCAAATATTATTGATAACAGTGACACTGTTCGCTTTGTTTGGCAT GAAATTAGTTTATAACAGTGATATTGTAGCTTATTGCTGTGAATTATCTAAAAAGTGTGAGATTGTAGTTAAAGCTTATGACAGATTGAAGAGTGCTTTG CAAAACTAGCTGATTCAATTAAAGTTTGCAAAAATCAATTGTATTGGGGATAAAAATTGTCACGTGATGAAAGATTATGGGGGCGGGTGCAGGATGTGAC TGTACTGAAATTTTTAACTGATGGGGTTCTACTAAGGGAGATGATGGATGATCCTCTTTTGACCAAATATAGTGTCATAATGGTAGATGAAGCTCATGAA AGGTCAATTTCAACTGACATTTTACTTGGACTATTGAAAAAGATTCAACGACGTCGACCAGAGTTGCGTTTGATTATAGCTTCTGCTACTATTGAAGCAA AGTCAATGTCTGACTTCTTCAGAACTAGACACAGACAAAAGTAAGCTGAAAAATGCTAGGTTTCTCTACCAAAGATTACCAGTGGATGAACATCTCTTCC CATAAGCCTTCTACATCTGTCGGTATCTTAATACCTATTATTATATAGTGTGTATTTGAAATTCTTGTTGATTCATTCCTGTCTTGAATCTTGAGTAAGT AGGTTTTGATTGTAAACTAAAAAGCATTCACTGGTTAAACCATCTATATGCTGTAAACAGAAAAAAGCGCCGAGAACCTGAAAATGAGGACAGTCGACTG CAATTGGAACCTGCAATCTTATCAGTCGAGGGTAGAAGCTTCAATGTGCAAATTAATTATGCTGAGGAACCTGTCCACGACTATGTTCAAGCTGTTGTTT CAACAGTACTCTCGATTCATGAAAGGGAGTCCACAGGAGATGTTCTAGTCTTTCTTACTGGCCAAGATGATATTGATGCTGCTATTCATTTACTTAATGA AGAAGTTCAAAATAATGGCAAACGATCTTCAGGGTTGGTTCTTTTGCCTCTGTATTCTGGACTTCCTCGTGCTGAACAGGAGTTAGTGTTTTCTCCAACT CCTAGAGGGAAAAGGAAAGTAGTAATTTCTACTAATATAGCAGAAACATCACTCACACTGGAGGGCGTTGTGTATGTTGTTGACAGTGGATTCTCAAAAC AGCGATTCTACAATCCGGTTTCTGATATCGAAAATCTGGTTGTGGCACCAATATCTAGAGCTTCTGCTAGGCAAAGAGCTGGTAGGGCTGGACGAGTTCG ACCTGGAAAGTGTTACAGGCTATATACTGAAGAATATTTTCTAAATGAGATGCCTAATGATGGAATTCCAGAGATACAGAGATCAAATCTTGTCTCATGT GTAATCCAGTTGAAGGCCTTGGGAATTGATAATATATTGGGCTTTGATTGGCCAGCATCTCCGTCTCCTGAAGCAATGATCCGAGCATTGGAAGTTCTTT ACTCACTCGGGGTCTTGGATGATGATGCTAAGCTTACTTCACCAGTTGGATTTCAAGTTGCAGAGATTCCACTTGACCCAATGATCGCAAAAATGATAAT AGCTTCCAACCAATTTGGGTGTTCAGAGGAAATAATCACAATTGCTGCTGTTCTTTCCATTCAATCTATCTGGATCTCAGGGAGAGGGATACAAAAGGAA TCAGATGAAGCTAAATTGAGATTTGCTGCTGCAGAGGGTGACCATGTAACATTCCTTAATGTATATAAGGGGTTTCTTCAGTCTAGTAAATCTTCACAGT GGTGTCACAAGAACTATGTGAACTACCAAGCGATGAGAAAGGTTATTGAGGTTAGAGAACAACTCAAAAGAATTGCACATAGGATAGGCATAGTCTTAAA ATCTTGCGAAAGTGATATGCAGGCTGTTAGAAAAGCAGTCACTTCTGGCTTTTTTGCTAATGCGTGCAGTCTAGAGCCATACAGTCATAATGGGATGTAC AAGACGTTAAGAGGATCACAAGAAGTTTATATTCACCCATCATCCGTGCTATTCAGGGTAAATCCAAAGTGGGTTATTTACAATTCTCTTGTATCAACTG ACCGACAATACATGCGTAACGTCATAACTGTCGATCCCTCGTGGCTATTGGAGGCTGCTCCTCACTTCTATCAGTTACAGCAGTCTAATCCTCTTTTCTG ATTCCCTTACCATTACTAATTGGAATAGATTGTTATCATATATCAACTCAGTTCAAGTGGATCAGAATTATGTACCTTTTGTTGCTTTTGAAGAGTGAGT TTCATCTCAATTATTACAAATTTATGACCAAGTCATTCCATAACACCTGCACCAAACTAACCACATTACTAACCAGTGTCTGTAATTGTCTCCTTCACAA TTGGTATTTCATTTTTAAGGTTATGTATACAATTTTCTGAAGTGAAAATGTTAAGCTTCAGTTATATCCCTATATATGTTTATAGATTGGTATGTGTTCT TGAATGCATGGAATAATAGGGGTACTTGTGTATGACCCATAAAAGTTGAAAAACCAAATATTATTGCAGGATTTTGGATACTTAGCTTAAATATCCATGT ACGATTTGTCACTAAATGTCACACCATTCAAC
• Tissue: flowers
• Gene name: LI_gene_23243;
• Additional information: details;

Expression of Ll_transcript_144526

FPKM

• FPAB: 0.4
• FPNAB: 0.2
• LF1: 0.2
• LF2: 0
• LF3: 0.2
• LF4: 0.2
• UF1: 0.4
• UF2: 0.3
• UF3: 0
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_144526

• Blastp: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 78.85% of identity
• Blastx: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 77.26% of identity
• Eggnog: helicase(COG1643)
• Kegg: Link to kegg annotations (AT4G18465)
• CantataDB: Link to cantataDB annotations (CNT0002241)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440202.1)
• Pfam: Helicase associated domain (HA2) (PF04408.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;