| Id Trinity | FTRINITY_DN51917_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_144514 |
| Sequence | GATGTGACTGTACTGAAATTTTTAACTGATGGGGTTCTACTAAGGGAGATGATGGATGATCCTCTTTTGACCAAATATAGTGTCATAATGGTAGATGAAG CTCATGAAAGGTCAATTTCAACTGACATTTTACTTGGACTATTGAAAAAGATTCAACGACGTCGACCAGAGTTGCGTTTGATTATAGCTTCTGCTACTAT TGAAGCAAAGTCAATGTCTGACTTCTTCAGAACTAGGTATTGTTCTGATCTTGCTGTTATAATTGTTCTTCCTTTTCTTTTCCTTTTAAACACTTCATTG GAAACTGTATTTACAGAATTGGTCTTTATTGGAAAATAACACTATAATATTTTATCAGATAAAACAACCTAAAGTGCAAATGTTTGATTTTAAGATTCAC CTGGTTTATGTTTAGACACAGACAAAAGTAAGCTGAAAAATGCTAGGTTTCTCTACCAAAGATTACCAGTGGATGAACATCTCTTCCCATAAGCCTTCTA CATCTAAAAAAGCGCCGAGAACCTGAAAATGAGGACAGTCGACTGCAATTGGAACCTGCAATCTTATCAGTCGAGGGTAGAAGCTTCAATGTGCAAATTA ATTATGCTGAGGAACCTGTCCACGACTATGTTCAAGCTGTTGTTTCAACAGTACTCTCGATTCATGAAAGGGAGTCCACAGGAGATGTTCTAGTCTTTCT TACTGGCCAAGATGATATTGATGCTGCTATTCATTTACTTAATGAAGAAGTTCAAAATAATGGCAAACGATCTTCAGGGTTGGTTCTTTTGCCTCTGTAT TCTGGACTTCCTCGTGCTGAACAGGAGTTAGTGTTTTCTCCAACTCCTAGAGGGAAAAGGAAAGTAGTAATTTCTACTAATATAGCAGAAACATCACTCA CACTGGAGGGCGTTGTGTATGTTGTTGACAGTGGATTCTCAAAACAGCGATTCTACAATCCGGTTTCTGATATCGAAAATCTGGTTGTGGCACCAATATC TAGAGCTTCTGCTAGGCAAAGAGCTGGTAGGGCTGGACGAGTTCGACCTGGAAAGTGTTACAGGCTATATACTGAAGAATATTTTCTAAATGAGATGCCT AATGATGGAATTCCAGAGATACAGAGATCAAATCTTGTCTCATGTGTAATCCAGTTGAAGGCCTTGGGAATTGATAATATATTGGGCTTTGATTGGCCAG CATCTCCGTCTCCTGAAGCAATGATCCGAGCATTGGAAGTTCTTTACTCACTCGGGGTCTTGGATGATGATGCTAAGCTTACTTCACCAGTTGGATTTCA AGTTGCAGAGATTCCACTTGACCCAATGATCGCAAAAATGATAATAGCTTCCAACCAATTTGGGTGTTCAGAGGAAATAATCACAATTGCTGCTGTTCTT TCCATTCAATCTATCTGGATCTCAGGGAGAGGGATACAAAAGGAATCAGATGAAGCTAAATTGAGATTTGCTGCTGCAGAGGGTGACCATGTAACATTCC TTAATGTATATAAGGGGTTTCTTCAGTCTAGTAAATCTTCACAGTGGTGTCACAAGAACTATGTGAACTACCAAGCGATGAGAAAGGTTATTGAGGTTAG AGAACAACTCAAAAGAATTGCACATAGGATAGGCATAGTCTTAAAATCTTGCGAAAGTGATATGCAGGCTGTTAGAAAAGCAGTCACTTCTGGCTTTTTT GCTAATGCGTGCAGTCTAGAGGTGAGTGACTTCTTGATTAGGACACAAATGTTATTTATGATAGATCATAATGGCATAGTTCGACCCATGTAGCCGATAT TACCTAGTGGGATTAAGACTTGGATGTTGTTGTAAAGTTTTGCCGTATATTAAATTTTGTGTGAATCAAAATAACTTGACTTGTTGGCTATTTTATTTTT ATCCGTGCTTGGTTAAAAGCCATACAGTCATAATGGGATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_23243; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_144514
| Blastp | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 79.9% of identity |
|---|---|
| Blastx | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 77.53% of identity |
| Eggnog | helicase(COG1643) |
| Kegg | Link to kegg annotations (AT4G18465) |
| CantataDB | Link to cantataDB annotations (CNT0002241) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440202.1) |
| Pfam | Helicase associated domain (HA2) (PF04408.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |