Ll_transcript_144518

• Id Trinity: FTRINITY_DN51917_c0_g1_i8
• Name Transcript: Ll_transcript_144518
• Sequence: ATTTTAAAAAATAATAAATCAGTAGTTTATTTGAAAAGAGAAAACTCCATAACTGAAACAAGAAATGGATTCTAGGGTTTGGTGAAGCGCAACGCAGAGA GTGAAGAAATGTCGTCACAGTTCTGGAAACCAGGTACCGAAAAGCCTCGTATATTAGAAGACGAAGAAGGTTCCGTTATCTTCTTATCCAATTCGCTATC ATCATCTTCTTATTCTGAGAAACAGAGGCAGCGATTACCTGTGTTCAAGTATCGCAATGCAATTCTATACCTAGTTGAGACTCATGGAACTACAATAATA GTTGGTGAGACAGGGAGTGGTAAAAGCACTCAAATTCCTCAGTACCTCATAGAAGCAGGTTGGGGCCACGGTGGCCGTCTCATCGGTTGTACTCAACCGC GGCGTCTCGCGGTTCAGGCCGTTGCGTCTCGGGTTGCGCAAGAGATGGGAGTGCAATTGGGTGAAGAAGTTGGTTACACTATTCGCTTTGAAGATGTTAC AAAATCAGATGTGACTGTACTGAAATTTTTAACTGATGGGGTTCTACTAAGGGAGATGATGGATGATCCTCTTTTGACCAAATATAGTGTCATAATGGTA GATGAAGCTCATGAAAGGTCAATTTCAACTGACATTTTACTTGGACTATTGAAAAAGATTCAACGACGTCGACCAGAGTTGCGTTTGATTATAGCTTCTG CTACTATTGAAGCAAAGTCAATGTCTGACTTCTTCAGAACTAGAAAAAAGCGCCGAGAACCTGAAAATGAGGACAGTCGACTGCAATTGGAACCTGCAAT CTTATCAGTCGAGGGTAGAAGCTTCAATGTGCAAATTAATTATGCTGAGGAACCTGTCCACGACTATGTTCAAGCTGTTGTTTCAACAGTACTCTCGATT CATGAAAGGGAGTCCACAGGAGATGTTCTAGTCTTTCTTACTGGCCAAGATGATATTGATGCTGCTATTCATTTACTTAATGAAGAAGTTCAAAATAATG GCAAACGATCTTCAGGGTTGGTTCTTTTGCCTCTGTATTCTGGACTTCCTCGTGCTGAACAGGAGTTAGTGTTTTCTCCAACTCCTAGAGGGAAAAGGAA AGTAGTAATTTCTACTAATATAGCAGAAACATCACTCACACTGGAGGGCGTTGTGTATGTTGTTGACAGTGGATTCTCAAAACAGCGATTCTACAATCCG GTTTCTGATATCGAAAATCTGGTTGTGGCACCAATATCTAGAGCTTCTGCTAGGCAAAGAGCTGGTAGGGCTGGACGAGTTCGACCTGGAAAGTGTTACA GGCTATATACTGAAGAATATTTTCTAAATGAGATGCCTAATGATGGAATTCCAGAGATACAGAGATCAAATCTTGTCTCATGTGTAATCCAGTTGAAGGC CTTGGGAATTGATAATATATTGGGCTTTGATTGGCCAGCATCTCCGTCTCCTGAAGCAATGATCCGAGCATTGGAAGTTCTTTACTCACTCGGGGTCTTG GATGATGATGCTAAGCTTACTTCACCAGTTGGATTTCAAGTTGCAGAGATTCCACTTGACCCAATGATCGCAAAAATGATAATAGCTTCCAACCAATTTG GGTGTTCAGAGGAAATAATCACAATTGCTGCTGTTCTTTCCATTCAATCTATCTGGATCTCAGGGAGAGGGATACAAAAGGAATCAGATGAAGCTAAATT GAGATTTGCTGCTGCAGAGGGTGACCATGTAACATTCCTTAATGTATATAAGGGGTTTCTTCAGTCTAGTAAATCTTCACAGTGGTGTCACAAGAACTAT GTGAACTACCAAGCGATGAGAAAGGTTATTGAGGTTAGAGAACAACTCAAAAGAATTGCACATAGGATAGGCATAGTCTTAAAATCTTGCGAAAGTGATA TGCAGGCTGTTAGAAAAGCAGTCACTTCTGGCTTTTTTGCTAATGCGTGCAGTCTAGAGCCATACAGTCATAATGGGATGTACAAGACGTTAAGAGGATC ACAAGAAGTTTATATTCACCCATCATCCGTGCTATTCAGGGTAAATCCAAAGTGGGTTATTTACAATTCTCTTGTATCAACTGACCGACAATACATGCGT AACGTCATAACTGTCGATCCCTCGTGGCTATTGGAGGCTGCTCCTCACTTCTATCAGTTACAGCAGTCTAATCCTCTTTTCTGATTCCCTTACCATTACT AATTGGAATAGATTGTTATCATATATCAACTCAGTTCAAGTGGATCAGAATTATGTACCTTTTGTTGCTTTTGAAGAGTGAGTTTCATCTCAATTATTAC AAATTTATGACCAAGTCATTCCATAACACCTGCACCAAACTAACCACATTACTAACCAGTGTCTGTAATTGTCTCCTTCACAATTGGTATTTCATTTTTA AGGTTATGTATACAATTTTCTGAAGTGAAAATGTTAAGCTTCAGTTATATCCCTATATATGTTTATAGATTGGTATGTGTTCTTGAATGCATGGAATAAT AGGGGTACTTGTGTATGACCCATAAAAGTTGAAAAACCAAATATTATTGCAGGATTTTGGATACTTAGCTTAAATATCCATGTACGATTTGTCACTAAAT GTCACACCATTCAAC
• Tissue: flowers
• Gene name: LI_gene_23243;
• Additional information: details;

Expression of Ll_transcript_144518

FPKM

• FPAB: 5.6
• FPNAB: 7.4
• LF1: 7.3
• LF2: 6.5
• LF3: 6.7
• LF4: 5.7
• UF1: 4.6
• UF2: 6.7
• UF3: 5.9
• UF4: 5.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_144518

• Blastp: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 77.68% of identity
• Blastx: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 77.39% of identity
• Eggnog: helicase(COG1643)
• Kegg: Link to kegg annotations (AT4G18465)
• CantataDB: Link to cantataDB annotations (CNT0002241)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440199.1)
• Pfam: Helicase conserved C-terminal domain (PF00271.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;