Id Trinity | FTRINITY_DN51941_c1_g4_i6 |
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Name Transcript | Ll_transcript_143744 |
Sequence | CGACTTCAATATTTGTTTATTTATATGCATTATATGAAAGTCAAAAGCCACAACACCTGTTTGCTGTTTCACTCTGTTAACAAAAGTTCGAGGCTTTGAG GACAAGAAAAAAATAAGAAGCAAACAAAAATGGTGAAACAGCTTACCTTTCTTCTTCTTCTTCTTATTATTATTATTCCCTTCTTTGCCTTTGGATTTAC AGAATCCCAATCTTCTTATGTTCTAATGCCTCACGCTGCTGATTCCTTCAATGTCAGCTACATCCAGATCAACAACGCCGGGACTTGTTCATATTCCTTG GTTATATCTACTTCTTGCTCCTCTCCTAAGTACACAAGGGATCAAATCAGTATTGCTTTTGGTGATGCTTATGCCAATCAGATATACGCACCGAGACTGG ATGATCCAGCTTCAGGTACATTTGAAAGCTGTTCTTCAGATACATTTCAGATAAATGGTCCATGTGCATATCAGATATGTTATGTGTACCTATATAGATC TGGATATGAGGGTTGGAAACCTGAAAGTGTGAAAATCAGTGGTTATAACAGCCGGCCTGTTACTTTCTATTACAACACATACATCCCTAGTGATACATGG TATGGGTTTAATTTATGCAACCATGCTTCTTCTTCATTCCAAGTATCTACTAAGACATGGTTTATATGTATTGGCCTAGGACTTTTTCTTAATTTTTGGA TTTAAGTTTATGTATTTCCCATCCTTTTTCTGTATTTCTTTTACCTTGTAACCATGAAACCTACTACTATATGGTAGAATAAATAGAGACACCAGATGTG GAGCTTTTTTAAAGTTTGTTTTATTTAGGATCAGTTTAATGTTTGAAGAATGAAGGCTGTATAAGACAAGAAGGGTTTGGGGGATGGTGTTGCAAATTCC AGACCCTGATGAATTATGATAAATTGGTGTGACATTGAAATGAATTATACTTTGAAAGGAAGCAATGAGTAAGAATAAAGATTTGGTTGTTGTTGTGACA AGAAGTGTATGAAAAATTTAGCATTAAATAATTTGAAGGTTGTAAGATGTGATGTGATTCAGTTAACATTATTCTGACTTCTGGGTTATGATATATAGGA AGCAAGAATGGTCAAAGTTTCCATCTTGCCCATGTTTCTAATTATTTAAAACCTTATGATATATATAGTTCAGCATCAGGATGGAAAGTAAAACTTTGAT CTATAAGCCATAATCAATATCTTTGTAGGCACTATTTATTACTCGCCATGCTAATTGTTGAATCATTGCCATTTCAGCCTTTCTGAGAGGCTAGCTGCAA TTTATATGGTAAATATTGTAAAACTGTAAGC BLAST |
Tissue | flowers |
Gene name | LI_gene_23317; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_143744
Blastp | Embryo-specific protein ATS3B from Arabidopsis with 60.84% of identity |
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Blastx | Embryo-specific protein ATS3B from Arabidopsis with 69.85% of identity |
Eggnog | Embryo-specific protein 3, (ATS3)(ENOG410YRBB) |
Kegg | Link to kegg annotations (AT5G62200) |
CantataDB | Link to cantataDB annotations (CNT0000105) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442171.1) |
Pfam | Embryo-specific protein 3, (ATS3) (PF06232.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |