| Id Trinity | FTRINITY_DN51953_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_144312 |
| Sequence | CAAATGCAAGGTAACATAAACATGTAAAAAAACACCACCCACCTTTTTCAGTTCAACTTCAACGGAGGATAACATAAACATATAAACCCCGAACTAGGGT TTAACCTCACTTAAAAAACACCTTCAAATTTCAAACCCACAAAACGGAAGAGGAAGTTGAGTAACACAATGTCCGAACCAGAACCAGAAACAGTTTCCAT GGCTCCTCTCGTCGCTTCGCTATCCAACAGCCTCCACCAAGTCCCTCCCTCCGCCGTGCCGGCAATGCTTGATTGCATTCTGCTTTCAACCGGTTCTTCG CCGCACTCTCTCTTTGCTTCACTTCTCCATCACTTCCTTCCCCTTCTTGAGGATATATCCAAGGAGGGTGATAATTTGGATTCTGATAAACTACTTCATC TTCAGTCACTGTGGGCCACATTTTGTCACCTCTTGAAGAAAATAGGGGATGATTCTGACGCATTGCAATCCTTTATTTGGAGATGTTTTCTTCCTTTAGC TAAGGCACTACAGGCATCTCAACACGCTTTGCTTAATCAGATTACAGAATCTTTCATGGACGTTGTGATTGAAACTCACACCTGGAAAGTTCTCAAAGGA ACTTTTGTGCCAATTTTTTTAAGATCAATTGGTCTTTCCATGGGTATGCTTCATAATGGTGATTTGGATTTCTATGAATGGAGTAGCAAATCATTTTTCC AGGGTTCATACGATGTTGCAACGGATCCACTAATAGAGAAGGAATTAGTGCCGTCCTATTCAATTAACTTTTCATTGCCAACATCATGTAGTGTTTTGTG TGTAATTCTGGAAGCTGCTCTCGACTATCTGCAAACAGATCCAATATGTAAATCATCAGAAGAAAAAGGGTGTTTTGCTGATAATTTTGTTAAAACTTTA ATATGGGAATTATGTAATATGATTGAACGTATGCTTTTGCAAAGTTCAGAGCACCGGTCTTGTGGAGTTGGTTTTCTTCTTCCTATTGTTCTTAAAGCAT TTCCTACCAAAAGCTCATTTGAAGTTTCAATTCGTGGGCAGAAACATGTTTTTTCTTGGGAGCATTTCTTCATCAAAATGTGGAATTGCTGCAGAACACT GCTTTCAACTGGACCTTTAGAGAGAAGAGAGGCATTTAATGTTCTCTCTTTGTATTTACCTTTTTCCTTGTCTACAAAAGAAAGTAAAAATGCTGTTGAA GATTTTGACATCAGAGAAGAAAAAGAGTTCTGGGATGAAATAAGGATGGGGCTGGTTGACAAGGAGAGTTTAGTGAGGAAGCAGAGTCTACATATATTGA AGATGACTCTGAACTTACAAGAAGGAACCAATTCCATGCCTAGCATTTTAAAACAGGAGACCGAGGGAAAGCATTCAGTACCTCTTGGTTTGACAAAGAA GGAGCAGTGGGCCTACAAGGAAGCCAAATCACTTGGTGTTGGGAAGATTTCGACTTCAGATGACCTAATTTTCGACAACAAACAGTATTGGGACGCATTT GTACTTCTATATGAGATGCTTGAAGAATATGGTACCCATTTAGTTGAGGCAGCTTGGAATCATCAGGTCTCTCTGTTGCTTCATTTCTCTGGGTCATGTG TTAGAAGCAATATCTGTAAAGTTCATGAAAATCAAGTTGAAATATATGGCGAGACCTTCAGCTGGTTATCTATTTTATGGGAACGAGGCCTTTGTCATGA CAATCCTCAAGTAAGGTGCTTGATCATGCAGTCTTTTCTGGACATCAATTGGGACAATTATGGGAACTACATTAACTCGGTGCCTGAAGCCTTTGTTCTT GGTCCATTTCTGCAAGGGCTGAATGATCCAATACACCACAAAGAGTTTGGTGTGAAAGGGGTTTACATGTCAAAAGTGATTGAAGGTGCAGCTCGGTTCC TACACCATTATGCTAATTTCGTGGATCCAAGCATCTACTGCTAAACATCAACCTTTTGGACGAGCTGGACTTATGGGCCTTGCTGAATGCATTGCGTCAG CTGCTAATGGCATTGGGAGGGTTATTCTTGCCAGGACGAAATCATTTAAGGGCACTTTTCCAGTGGAACCTGTTTCTGGAGTTGCAAATCCAATGGATAA AAAAGAGTTACTAGATGTTTTTAGATATGTTGTTGAGAGCAGCAAACAACACTTCAATCCTAGTTACCGTCAGCAAGTTTGTGGCAAAATTCTGGAGGCT GCTGTTTCAGTGGTGTGTACATTTGATATTCCTCTTGAGATACTTTTGCTTTTCATTTCAGCATTCCCACGGGAATTTACTGATTATGGTGGTCAATTAA GGGTGACTGTGCAAAGATGGCTTTCAGGATGTGGTTACAAGGATAGCTGTGCCAATTGCTGTAGTAATGAAATGAAGCTCTGGAACTGTCTATATGACTT CCCTCATAGCTTTGTCTATAATCATCTTTCCAATGATGCTTCTCTTAATTATGATGATGATGACTTGAGTGCATGGGAGTTTGAAGCAAATAGATGGGCA AGAGTGCTTTTCCTTGCAATCAAGGAAGAACATCCTTTGGAACCCATTTTAATGTTTGTTCAAAAGAATGGCCCTAATATCTTGGAACAAAACCATGATA CAAGATACATCACAGTCAAATTCTTGATTCTCGCCATGAGCTTGATTCTGGAGCTTCATAGAATAAAGGAAAGAGTGGTTGAATCTGGTAATAAAGCTAA AAAAAGTGCATTCCCTGGAATTGTTGATGATCTGAGTCTCATAGGCGGTGTGTCTGAGAAGCTTGTTGATAAATATCTTTATTTATTGGATGATCTGGTT CAGTTTGCAAACCAGTCTTGTTCCATTTTCTGGTCTGATGTTATTGCAGAGAACACTGCACTGCCAGGTGCAGTGAAAGGAAAGCTTGGAGGCCCTAGTC AACGGAGGCTGTCAATTTCAGCCACCACTGCTGTCTTGCAGGCGATTATGTCAGTGAAGGCAATATCATCAATCTTGACGTTCTGTAAACAAGTTAAAAG TGATGCTCCGTATAACTCTGCTCTGACTTTTTTGTGGCAATTTTTCTGGAGGACTACTAGATCTCCAGCTTCTTGTTCAGAGATCGGAGCAGAAATTTGT CTTGCAGCATATGAAGCTCTAGTTTCTGTTCTGAGGGTTCTAGCATCCACAAACTTCCCTCAATCTTTACATCTCATCGAGGAAAATGAACAACTGTTAT CAGAGACGGATGGCATGCCACAGTTAGATTCTATGTTTGCATCTTTTATTCAAAATATGAATGATCTCCTAGGAACAGGGGTTTTGGCAAGAACTCGAAG GGCTGTTTTGTTGGATATTAAGTGGGCGTGCCTAGAATCTTTGTTGTCAATTCCTTCTTATACTCTCAAGAGTGGATTTCATTTGGTGGAAAATCACACT TTCTTCTCAGATGGCACTCTGAGATGCATTTTCAATGATCTTGTTCAGAGCCTTGAAAATGCCGGGGAAAGTTCTGTTTTGTCCATGCTGAGATCACTGA GAATGTTAATAGAGCTAGTTGGCAAAGTGATGTCAACTGAGGTCATTTCCCAAAGTCATGTAATAGACACTCAGATGATGTGGAATTTGGTCCGTTCCTC TTGGATATTGCACATAAGCTGCAAAAAGCGAAGAGTTGCTTCAATCTCTGCTCTTTTATCATCTGTTTTGCATCCTTTGGTTTTTAATGATGAGCACATG CATCAAACAGACAATGGACCTGGACCCTTGAAATGGTTTATAGAAAATCTTCTCGAAGAAGGCACAAAGAGTCCTCGCACAATTCGTCTTGCAGCATTAC ATTTAACAGGTTTATGGCTCTTGAATCCTAGGATTATAAAGTTTTATATGAAGGAGCTGAAATTGCTATCCCTCTATGGTTCAGTTGCATTTGATGAGGA TTTTGAAGCTGAACTAGCTGACAACAATGATGCAAGACTGGAGGTTTCTGTATTGGCTATGAGCCCTGATTCTGAGCTTACTGAAGCATTTATTAATACA GAGTTGTATGCACGTGTATCAGTTGCTGTTCTATTTCACAAGTTGGCTGATTTGGCTAGTATGGTGGGGTTACCAAATGAAGACGCTAATTGCATAGCAG CACTAGAATCTGGCAAACTGTTCCTGCTAGAGCTTCTTGACTCTGCGGTGAATGATAAAGATCTTGTGAAGGAGTTATACAAAAAGTATAGTGCTATTCA CAGACGCAAAATACGTGCTTGGCAAATAATATGTGTCCTGTCACCATTTGTTGACAAAGATATAGTCGAGAAAGTTTTCGATTACTTGTATACATCACTT AATAGAAATAACTTACCTGCTGTTCGTCAATACTTGGAGACATTTGCAATCAACATTTACTTGAAGTTTCCGTCACTCGTTAAAGAACAATTGGTCCCTA TATTGCGGGATTATGACACAAAGCAACAGGCGCTATCTTCATATGTATTCATAGCAGCTAATGTCATTCTCAATTCATCTAAAGACGTTCAACCTAGGCA TTTGGATGAATTGTTTCCTCCTCTAGTTCCACTGTTAACCTCACATCACCACAGCTTGCGGGGTTTTACTCAGTTACTAGTATACCAAATTCTGCTTAAA CTATTTCCACTGTTGGATTCTTGCTCTTCTGAGATGTTACCTTTAGAGAAGAGGTGTTTTGTGGATTTGAAAATGTACCTCGAAAAAAATTCTGATTGTG CACGCTTACGTGCATCAATGGTAGGATATCTTGATGCTTATAATCCAAATAGCTCTGCCACCCCTGCTGGAATTTTCGTCAATCGAGTTGAGGAGGTTGA TTTTGAATGTGTTCCGACATCACTCATGGAGCAACTTCTCAAATTTCTAAATGATGCTAGAGAAGAGCTGCGGTCTTCAATGGCAAAGGATGTGGTGACT ATCAGGAATGAGACTCTAAAATTTAATGGAGATAAGAATTGCAAAGAGAGTTTCTCTGGTGGCATTGAAGGAGCCATGCCTAAAGATATGCCCTCGGATT TCCAGAAAAAGGTTACTCTCACCAAACATGACAAGGGGGATGCAGAAGCAGAAATCCGTTTTAGAAATGATGAAACCTACAGAAAAATGGCTGAAATAGA AAGGGATGACCTCCTTCTGGATCAAATGCTGCAGTCAAGAAGATCATCTCTCGATCGACTGAAAGCAAGCCGACAGAATATTATCCTTGTGGCTTCATTG CTTGACCGCATACCCAATCTTGCTGGCTTGGCACGTACATGCGAGGTATTTAGAGCATCGGGGCTGGCTATTGCTGATACAAGTATCATAAGCGACAAAC AGTTCCAACTAATCAGTGTGACAGCTGAAAAGTGGGTTCCCATAACTGAAGTCCCAGTGGATAGCTTGAAGGCGTACTTGCAGAAAAAAAAGAGAGAAGG ATTCTCCATCCTGGGTTTGGAACAAACTGCAAATAGTGTACCCCTTGATCAGTATAACTTTCCAAAAAACACGGTTCTGGTTCTTGGCCGAGAGAAGGAA GGTATTCCTGTGGATATAATCCATATTCTTGATGACTGCATTGAAATTCCCCAATTTGGTGTTGTTAGATCTCTCAATGTTCATGTCAGTGGTGCTATTG CTCTCTGGGAGTATACTAGACAACAGAGATCTCAATAGTCCATGATTGAATGAGTAGCCGGTTATATTACAATACAACAGCAACAACCAAACGTTTATCC CATTAGGTGGGTAGCCGATTATATTACAATACATATAAATAAAATATTTGTTGTATTATTCCCCATGAGAAACTTAGTGGTTAGGATCATTCTTTATTTA ATACAGACACTTCAAAATAGTTGTCTGTCATGGACATGTACCATTATCATACACTTCATGAATAGTGTTATACACAACTATATTTTCAAATTTTGATATT TACCTTCTGAATTTACACCATTGTAAATCAAAATGTTATAATAATTTGATAAATCTTGGTATATTATGTTTACTACTCACGCAACTACTTCAGACA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_23349; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_144312
| Blastp | Probable methyltransferase TARBP1 from Homo with 55.49% of identity |
|---|---|
| Blastx | Probable methyltransferase TARBP1 from Homo with 48.17% of identity |
| Eggnog | Methyltransferase(COG0566) |
| Kegg | Link to kegg annotations (6894) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421761.1) |
| Pfam | SpoU rRNA Methylase family (PF00588.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |