| Id Trinity | FTRINITY_DN51977_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_144392 |
| Sequence | CTTAGTTCTATTGATCAGCAATTTGAGTATCTAAATGGTGAATTTTGGTAAATTCCTTAGGTGTGAGGTTCTCAGATCTGAAAAAGATTATGATTTTATA CCTGGAATTGTGTTATGTACTTCAAAGTAAACCAGTGCACAAAAAAGTAGTGTTAAAAAGTTGCTATAGTTGGACACTTGGACTTAGAAATGCACATGTT TTTATAAGGCCATTTTCATATGTTAAATATGTATGTCACTTACAAGAGTATGCATAGCTTATGTGAAGCATCTAAAGAGGTAATTTGAAGTGCTTATTCT TATGTTCTTTGTTTTCTGTTAATGACATTTCAGGAAAGTATCAAGTGATATGTTACAGAATGAGAGCTAAAAGTTGGATAAGTAAGAAGTTTAGCATTAG AGGGAAACTAAGAAAGATGAGTAAGTGTTTATGTTCTACCATGGAACAGTTTAAGGTTATTGATGATATAAGTTCTTCATCAGAGTCGTTGGCAACCAAA GACTACTCCGCAAGTGGCGGTTATTCCTCCCATCCTGGTGAAACAGAAACAAAGGTGGAAAATAGAAACATTGAAGAAGCAGAATCGTCTCTTCGCGAAA GTGGTTATTTAAACTACGAGGAAGCTAGAGCACTATTAGGAAGACTGGAGTATCAGAAAGGTAATATTGAAGCTGCACTTCATGTCTTTGAAGGAATAGA TATTGATGCTGTTATTCCCAAGATCAAAATTTCCATATCTAGAAGACATGCATCAAATAGATCCCTTTCCCAAAGTGATGCAATGCCTCCTATGTCAATT CCTGCTGTTAGTTTACTTCTTGAAGCTGTTTTTCTCAAGGCAAAATCATTGCAGACTCTTGGAAGGTTTCAAGGTGATTCTTTTATCTAGTTTCTTATGC TCATTTAATCTTTTTCATGCACATATCATCTTAGTTACCTTTCGCCTTACTGTGGAAACCGGTGATTTCTGTTAGATCCTTAAACATTCCGAACAAATCA AAGTCGTTTAATTTGCAGTCTATGAGTTATTTGTTAATGAACTTATGAATTTTTAGGTTCTGCTCAATCATGCAAAACTATTCTAGACACTTTTGAATCG GCATTACCAGAAGGTTTGCCTGAAAACTTTGTTTCAGACAGTAAATTACACGAGACTGTAATAAATGCGGTAGAACTGCTTCCAGAGTTGTGGAAACTTG CAGGTTCTCCTCAAGATGTCATCTCATCATATAGGCGTTCGTTGATTTATCACTGGAATCTTGACACTGAAACCATTTCAAGAATACAAAAGGACTTTGC TTTGTTTCTTTTGTACGGTGGTTGCGAAGCTAGCCCTCCTTCTCTACGCTCTCAGTTGGATGGTTCGTATGTTCCAATAAACAATATAGAAGAAGCTGTT CTTCTGCTTCTGATTGTGCTAAGAAAATCTGCTCTTGGAAGCATTGTTTTGGACCCTTCAATAATTGATCACCTTTCTTTTGCTCTAAGTGTTTCGGGTG AATTCATGACCCTGGCTAAACATATTGAGGAATTGCTTCCAGAAACAATGGAGAGAAAAGAAAGATATTATACTCTAGCTCTTTGTTACTGTGGAGAAGG TAATCATATGATTGCTTTGGATCTTTTGGGGAACTTTTTGAATAATAGAGAGAACTCGGATACCGTACAAGAATTACTTCTAGCTTCAAAAATTTGTGGA GACAACATGGTTTGTGTTGAAGATGGAATCAAATATGCTAACAAAGCCATTTCTCAGTTGCATGGAAAATGCATGCAGATGTTAGCTATTACAAATTGCA TACTAGGTGTTCTACTGTCCTCAAAATCGAGGTTAATTGGTTTTGAATCCGAGAAGGTTTTGATGCAGTCTAAAGCACTCAATGCTCTAGGAACTGCTGA AAGAATGATGAGGGAAAGTGATCCATACATTGTCCTTAATCTTTGTTTAGAATATGCTGAGCAGAGGAAGTTGAGCATTGCTTTTTATCATGCAGAGAAA CTGGTTGCCCTTGAAGGTGGATCTAGTATTACCGGATATATACTACTGGCACGAATTTTATCGGCTCAAAAGAATTTTGTAGATGCAGAGATTGTTATTG ATGCAGCTATAGATCAATGTGGAAAATGGGAACAAGGAGTTTTGTTGAGAACTAAAGCTAAACTGCGGATCGCGCAGGGAAAATTAAAGAATGCAATCGA GACATATACTTTTCTTCTTGCTGTTCTTCAAGTACAGAAAAAAAGTTCAGTTATTTCAAGTAAAGTTATGAAGAATAAGGGAAACTGCGACAGAAGACTG GAAATGGAAATTTGGCACGATTTAGCCAACGTGTACACATCGTTATCGCAGTGGCAGGACGCTGAAGTTTGTCTTGCAAAATCTCAGGCCATTAATCCCT ATTCTGCTTCTAGATGGCATTCCACAGGCCTACTTTTTGAAGCCAGAGGACTTCATCAAGAGGCTATGAAATCATTTAGAAAAGCATTAGATATTGATCC CAACCATGTCCCAAGTTTGATATGCACTGCTGGTGTTATGAGACATCTTGGTTGTCAATCATCTCCAATCATTAGAAGCCTTCTCACTGATGCACTATGG CTTGACAGGACTAACCCATCTACTTGGTACAATCTTGGATTGCTCTACAAAGATGATTTCGGGATATCGTCGCCGGAAGCTGCTGAATGCTTTCAGGCTG CAGCTTTTCTTGAAGAATCTTCTCCCATTGAACCCTTTAGATAGCCAATTTTGCTACAATTTTTGATTCTTTTTTGTTTTTGTTTGAAACATATATCATA GTGAGTTATAAGTCTGGTTGTAAAGTTCAGCTTTCTATAACTTTTGCATAGGTCATTTTGTTAGAACACAGCTAATGTCATTAATCTTATGTTGATAGAA AAAATTAGAGAAGTAATGTAATTAATCACTTCTATTTGGTGATTTTGTTCAGCAACTTATGATTTTATATTTTTATATATCATCTCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_23422; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_144392
| Blastp | Protein NPGR2 from Arabidopsis with 47.57% of identity |
|---|---|
| Blastx | Protein NPGR2 from Arabidopsis with 50.18% of identity |
| Eggnog | Tetratricopeptide repeat(ENOG410XQ09) |
| Kegg | Link to kegg annotations (AT4G28600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428019.1) |
| Pfam | Tetratricopeptide repeat (PF13181.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |