| Id Trinity | FTRINITY_DN52015_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_220355 |
| Sequence | TTAGCGCCTTACTCAATAGCTGCACCCACAAAAGCATTGGACCCTTTTCATTCCAAAACCCATAACACACTACAAACGTAACACACAGTGTAAATGTAAA GCTAGCATCTTTCAATAGCAGACTCCACAATAGCGCTACAAGCACCCCAAAACTTTCGTTCATTTCATTGCCGAAGATGATGATTATGGAAAATTTGTGT GTGAGATAGAAGATTGAAAACCAAAGTTATTTGTGGATTCAGACTAGTGATTTTTGAAATGGATAAAATAGCTGATTCTAGTGGTGAGAACAAGGAGGAT AATAAGGAAAAATCAATTCATCATTTTATAGTTCCTGATGATTCTTCTCTATGTCTGATTGATTTCCCTCCATATGAACTACCACCGTATGAGATTTCAC AGAGTTCAAATGAATTTGAGTCATTAGTTGTGGGATCAGATCATCAAAGAGAAGAACCGGAAGTGCATACGTATAAGCTTGTGGATTGGAATGATTCGTT TGCAATCAAGGTTGAGGAGTTATTGTTGTCTAATTTGCAAGCAATTTTCAAGGATGCAATCAAGCAGATTGTTGAGTTGGGTTATAGTGAAGATGTAGCT GAGAAAGCCCTTTCAAGGAAGGCCCTATACATACAGGAAGGAGACCCTGTTTCGAATATTGTTGATGATACATTGAATGTTTTGAAGGGAAAACATGTTG CCACCCCAGATGTTTTGATGGGAAAAGATATTGCTACTTTAGACATCGTCTTTGAAAATTTTCAGCACTTGGTGTATTACACCATGTTGGAGATGATCAT TGTGCTTCGTGAAGTCAGACCATCCCTAACAATCGGTGAAGCGATGTGGGTATTGTTGATGTGTGACTTGAATGTTTCACTGGCATGTACAGTGGAAGAT TGTCTGAATGTTGTTTTCGATGAGGAAAGTTGTATCAGTCCTTCCTCTACTCAATTAAAGTCAGAGGTTCAAAGGTCTGACGTAATTTCAAATTATAGTT CACCAACTTCCCAGGGCTCATCCCCCACTTACAAGAAATGTAAATCTGAAGCATCCCCGTTTGGGAAGCTCCAAAATTCAACCAATGATAAAAGCTATTT TCCTTCAGAAGTGGTAAAGTCTCAGGAAGAGAATATTTCACTGCCAACTGTTACTGGTAAACCCCCAGGAACTTCAGGGGGTGAATGTAAAGCAGGACAT TGTTCTAAGCGACACAATAGAAAAGAAATTGCAGCACTTAGGCAGAAGTTTCTCCATATGGAGAAAGTGTATAGGGCCCGTGGAAAAGGGGGTTTGAAGA CTGGTAAGTTTTCAAGTGTTGGTGGTTTGATGATTGAAAAAAGAATCAAACCACCATATGATATTCATAATCAGCAAATGAAAAGTGACTTTTCAAACAC AACAAGCAAACAAGGAGATTGTGCATCAGATGCAATGTGCCATGTCTCATCCAGTAGTGCATCTACTTTACCTGCAGGAAGCAGTTCAAAAACATTATCA GACACAATATCCTCTCAAATAGTGAATCCCGATATTTCAGCATCAGAAACAATGTCCACACCAAAATCTGAGCCTACCTCCTTTGATGCTCAGAATATTC TTGACGAGTGTGTTGGTATTCCGTATGATGAGTCTTTGGGTATGTATGTCCCACGAGACCAGAAGGATGAAATAATTTTGAAGTTAGTTCCTCGAGTGCA TTTATTGCAGGGTGAGCTACAAAGCTGGAGCAGCTGGACAAATCAAAAGGTTATGCAAGTTACTGGTAGGCTTGGTATGCTGCAGCCTGAGCTTAAAATG CTGAAGAATGAGAAGCAAGAAGCCGAAAATGATGCAAAACTTTTTCAGGAGAATGTTGTGAAGAGGATATCTGAGATGGAGAATACCATAGAGAATACTA AAAAGCAAATTGAGAATACTACTTCTATTGTTCTCATGCGTGATGCAGAAAACACATTGCTAAAGAACGAGTTGGATGCTGCTAAGTTGTCATTTGAAAA GTCAATGATGAGCCACCAACAAGCACTGGAGAGAGAACAAATTGCTCTTAGAAAATCAGAATCATTGAATAGCGAGAATGCTTTGCATCGAGATGAGCTT GAGAGAGAGAAACATAAGTTATCTAACTTACGACAACAACTTAACAAGGAGAAAACTCTTGTAGCCAGGTTTGAGGATAAAGTAGAAAAAGAGAGAGCGG AAATAGAAAAGGTCCTTAAACAGACTGCATCTATCATAGAGGAAAGGAAACAACTAGCAGAACAAACAAAAGCTGAGGAAGATAAGATCAGGGAAAAGGT AGCCGATAACTTACAAAAATATACGGAGGTGATTGCAAATCTTGAAACACAATTGGAAGAAAGAAAACAAAAATTAGAGTCTGAAAAAATTGTAGCACTT CGTAAAGGTAAGCTGACGGGGAGAAAGAAATGGGATTCGTCGCAGACCATGGTTAGCTGCCAAGCCAAATCTGCAACTGAAAGTTTGAGGCGGGAGCATG AGTGTGTCATGTGCCTATCTGAGGAGATGTCGGTAGTTTTTCTTCCATGCGCACATCAGGTTCTGTGTGCAGAATGCAACAAGCTCCATAAGAAACAAGG AATGAAGGATTGTCCTTCGTGTAGGGCTCCGATTCAACAGAGGATTCATGTTAGATTTGCTGGGCAGTAGAGAGTATTAATCATCCTGCATGGATGTGTA TCTTAGAGAGATTTTACAATAAAAGTAAGGATTCCTGAGAAGGTTCTTTTGAAGACCATGTAGGCCATTATGGCATTGTGTCTCACCTTCCTTTTTTGAT TATATATTTTGGTTTTGAATCTGAAACAGATCCTAGATGATGTCTCAAAAATAACAGCAAAGAAATATAAAGCTGCAAAGCAATTATTTTATATAAAAAA AA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_23524; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_220355
| Blastp | Putative E3 ubiquitin-protein ligase RF298 from Arabidopsis with 38.21% of identity |
|---|---|
| Blastx | Putative E3 ubiquitin-protein ligase RF298 from Arabidopsis with 38.21% of identity |
| Eggnog | e3 ubiquitin-protein ligase(ENOG410Y2TA) |
| Kegg | Link to kegg annotations (AT4G03000) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441814.1) |
| Pfam | Zinc finger, C3HC4 type (RING finger) (PF13920.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |