Ll_transcript_220356

Id TrinityFTRINITY_DN52015_c0_g1_i2
Name TranscriptLl_transcript_220356
SequenceTTAGCGCCTTACTCAATAGCTGCACCCACAAAAGCATTGGACCCTTTTCATTCCAAAACCCATAACACACTACAAACGTAACACACAGTGTAAATGTAAA GCTAGCATCTTTCAATAGCAGACTCCACAATAGCGCTACAAGCACCCCAAAACTTTCGTTCATTTCATTGCCGAAGATGATGATTATGGAAAATTTGTGT GTGAGTTTTCAATTAAGTAAGCCCTCATTTTGCTATAAGTTCTTGCTAAAGATAGAAGATTGAAAACCAAAGTTATTTGTGGATTCAGACTAGTGATTTT TGAAATGGATAAAATAGCTGATTCTAGTGGTGAGAACAAGGAGGATAATAAGGAAAAATCAATTCATCATTTTATAGTTCCTGATGATTCTTCTCTATGT CTGATTGATTTCCCTCCATATGAACTACCACCGTATGAGATTTCACAGAGTTCAAATGAATTTGAGTCATTAGTTGTGGGATCAGATCATCAAAGAGAAG AACCGGAAGTGCATACGTATAAGCTTGTGGATTGGAATGATTCGTTTGCAATCAAGGTTGAGGAGTTATTGTTGTCTAATTTGCAAGCAATTTTCAAGGA TGCAATCAAGCAGATTGTTGAGTTGGGTTATAGTGAAGATGTAGCTGAGAAAGCCCTTTCAAGGAAGGCCCTATACATACAGGAAGGAGACCCTGTTTCG AATATTGTTGATGATACATTGAATGTTTTGAAGGGAAAACATGTTGCCACCCCAGATGTTTTGATGGGAAAAGATATTGCTACTTTAGACATCGTCTTTG AAAATTTTCAGCACTTGGTGTATTACACCATGTTGGAGATGATCATTGTGCTTCGTGAAGTCAGACCATCCCTAACAATCGGTGAAGCGATGTGGGTATT GTTGATGTGTGACTTGAATGTTTCACTGGCATGTACAGTGGAAGATTGTCTGAATGTTGTTTTCGATGAGGAAAGTTGTATCAGTCCTTCCTCTACTCAA TTAAAGTCAGAGGTTCAAAGGTCTGACGTAATTTCAAATTATAGTTCACCAACTTCCCAGGGCTCATCCCCCACTTACAAGAAATGTAAATCTGAAGCAT CCCCGTTTGGGAAGCTCCAAAATTCAACCAATGATAAAAGCTATTTTCCTTCAGAAGTGGTAAAGTCTCAGGAAGAGAATATTTCACTGCCAACTGTTAC TGGTAAACCCCCAGGAACTTCAGGGGGTGAATGTAAAGCAGGACATTGTTCTAAGCGACACAATAGAAAAGAAATTGCAGCACTTAGGCAGAAGTTTCTC CATATGGAGAAAGTGTATAGGGCCCGTGGAAAAGGGGGTTTGAAGACTGGTAAGTTTTCAAGTGTTGGTGGTTTGATGATTGAAAAAAGAATCAAACCAC CATATGATATTCATAATCAGCAAATGAAAAGTGACTTTTCAAACACAACAAGCAAACAAGGAGATTGTGCATCAGATGCAATGTGCCATGTCTCATCCAG TAGTGCATCTACTTTACCTGCAGGAAGCAGTTCAAAAACATTATCAGACACAATATCCTCTCAAATAGTGAATCCCGATATTTCAGCATCAGAAACAATG TCCACACCAAAATCTGAGCCTACCTCCTTTGATGCTCAGAATATTCTTGACGAGTGTGTTGGTATTCCGTATGATGAGTCTTTGGGTATGTATGTCCCAC GAGACCAGAAGGATGAAATAATTTTGAAGTTAGTTCCTCGAGTGCATTTATTGCAGGGTGAGCTACAAAGCTGGAGCAGCTGGACAAATCAAAAGGTTAT GCAAGTTACTGGTAGGCTTGGTATGCTGCAGCCTGAGCTTAAAATGCTGAAGAATGAGAAGCAAGAAGCCGAAAATGATGCAAAACTTTTTCAGGAGAAT GTTGTGAAGAGGATATCTGAGATGGAGAATACCATAGAGAATACTAAAAAGCAAATTGAGAATACTACTTCTATTGTTCTCATGCGTGATGCAGAAAACA CATTGCTAAAGAACGAGTTGGATGCTGCTAAGTTGTCATTTGAAAAGTCAATGATGAGCCACCAACAAGCACTGGAGAGAGAACAAATTGCTCTTAGAAA ATCAGAATCATTGAATAGCGAGAATGCTTTGCATCGAGATGAGCTTGAGAGAGAGAAACATAAGTTATCTAACTTACGACAACAACTTAACAAGGAGAAA ACTCTTGTAGCCAGGTTTGAGGATAAAGTAGAAAAAGAGAGAGCGGAAATAGAAAAGGTCCTTAAACAGACTGCATCTATCATAGAGGAAAGGAAACAAC TAGCAGAACAAACAAAAGCTGAGGAAGATAAGATCAGGGAAAAGGTAGCCGATAACTTACAAAAATATACGGAGGTGATTGCAAATCTTGAAACACAATT GGAAGAAAGAAAACAAAAATTAGAGTCTGAAAAAATTGTAGCACTTCGTAAAGGTAAGCTGACGGGGAGAAAGAAATGGGATTCGTCGCAGACCATGGTT AGCTGCCAAGCCAAATCTGCAACTGAAAGTTTGAGGCGGGAGCATGAGTGTGTCATGTGCCTATCTGAGGAGATGTCGGTAGTTTTTCTTCCATGCGCAC ATCAGGTTCTGTGTGCAGAATGCAACAAGCTCCATAAGAAACAAGGAATGAAGGATTGTCCTTCGTGTAGGGCTCCGATTCAACAGAGGATTCATGTTAG ATTTGCTGGGCAGTAGAGAGTATTAATCATCCTGCATGGATGTGTATCTTAGAGAGATTTTACAATAAAAGTAAGGATTCCTGAGAAGGTTCTTTTGAAG ACCATGTAGGCCATTATGGCATTGTGTCTCACCTTCCTTTTTTGATTATATATTTTGGTTTTGAATCTGAAACAGATCCTAGATGATGTCTCAAAAATAA CAGCAAAGAAATATAAAGCTGCAAAGCAATTATTTTATATAAAAAAAA BLAST
Tissueflowers
Gene nameLI_gene_23524; 
Additional informationdetails; 

Expression of Ll_transcript_220356

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_220356
BlastpPutative E3 ubiquitin-protein ligase RF298 from Arabidopsis with 38.21% of identity
BlastxPutative E3 ubiquitin-protein ligase RF298 from Arabidopsis with 38.21% of identity
Eggnoge3 ubiquitin-protein ligase(ENOG410Y2TA)
KeggLink to kegg annotations (AT4G03000)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019441814.1)
PfamZinc finger, C3HC4 type (RING finger) (PF13920.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;