Ll_transcript_220774

• Id Trinity: FTRINITY_DN52025_c0_g2_i4
• Name Transcript: Ll_transcript_220774
• Sequence: GAAAATGCCACTTGATAGGTATATACAAAGATCCCGTTGCAAAATTGAATTGGCCCGATTCGAAATCCAAAGATAGTTGATGCGTTTTAGGTTTTTGGTT CACAAATTTTTCTAAATTCCATGGATGGCAACAATTTATCTTCCGATCAAGTCATTGCAGAAATGCTTGATATGGGTTTTGAGCATTCGAACATTGTTGA AGCCATAAAAGTTGTGGGCCCATCCATTACCAGTGTTGTTGATCATATCTTGAATGGTGCTAGTGTTGTAAGTAGAACTAACTGTGAAGCATCATCATCC ACTAGTACTGCTATCAAGTCTAAAGTTCATGCAAATAATGGGGAAGTTTTGAAAAAGAGAACTTTGCTGCCGTCCGGTCAAGTTCGACAATCGAGGATAC TCGATCATTTCCAACCCACCAATGGTAAAGTCAAAGAGAGCACGAAGAGTCATGTAGCTGTTGATGCAGTTGGCAATGTGGAAGAGCATAAGGAGCCTTT CTCCGAAGTGGTTGTTGATCCCTGTGTGATGTCGGGGTCAGTTGTAGCGGATTCTGAGGATGATTTGGATATTACATATGATTGGGAGAAGAAAGCTGGA ACTATCTTACAAAAGCATTTTGGTTTTTCATCATTGAAGAGTTTTCAAAAGAAGGCCTTGAATGCTTGGTTTGCACATAAAGACTGTCTTGTCCTGGCTG CAACAGGATCTGGGAAATCTCTATGCTTTCAGCTTCCTGCATTACTAACCGGGAAAGTGGTGGTTGTGATTTCGCCCTTAATAAGCCTGATGCATGATCA GTGCTTAAAGCTAGCAAGACATGGAATCAGTGCTTGCTTTCTCGGGTCTGGGCAACCTGACAATACTGTTGAACAGAAAGCTATGAAAGGCATGTATAGT ATAATTTATGTTTGCCCGGAGACCATCCTGAGATTGATTACACCACTGCAGGAGCTTGCAGAAAGTCGTGGTATTGCTTTATTCGCAATTGATGAGGTAC ATTGTGTTTCTAAATGGGGTCATGATTTCCGTCCAGACTACAGGTCTGTTTTATCCTTTCTATTTCCTCATATTTTATGGTTACTGAAAATGAAATGGAT CAGTTAGTGCACATAGAACATCTTAAACAATCACTACTTGTGGTTTGTATGCGAAAGAAACTAATAAGACAAACTGTTGGTTGATTCTATTGACTATCAC ATGTATCACCTCTGTTCTTTGTTTAGTCTTTAGCGGATACTTCACAATTTTGTAAAGGTCTTCATTCAACTGTCATAAGTATGACCTGTTTTTAAACGTC TTCTCTTGTTTCAGCCGTCTGTCTATGCTGAGGGAAAAATTTAATACCAGCAAGATGAAGTCCCTGAAATTTGATATACCTCTGATGGCCTTGACTGCCA CAGCTACAAAGAAAGTTCGAGAAGATATTTTGAAGTCATTGTGCTTGTCAAAAGATACTAATGTTGTACTCACCTCATTTTTTCGATCTAATTTACGCTT CACGGTAAAGCATACTAGATTGTCACAGGCTTCGTATGACAAAGATTTTCATGAATTGGTTGAAATATATGGTAGAAAGCAATATACTGATGAAAATAAA AGAGGTCTCATCTCAAAGGATTCAGATAATGTTTCCAACTCTGACACAGACGGTGATTCTCCTTATAATAAGGATGACAACGAAGACGACTATGCTGATA GAGATATTAATGTAATAGACTCAGGAAACAGGGAAAATATTAGAAAGGGTAAAGAATTGTCAGTTGAGTTCCTTGAAAATGACATTGATGACTTTCAAAG TGTTGATGACTGGGATGTTACCTGCGGTGAATTTTGTGCACAGCCTCCTCCCAATGAATGGGAGTCATCTGAGATAATTAATCCACCCAAGAAACCAGGA GGAAGACTTAGAATTCTTAAAGAACCTGTGCAAAAAGGACCGACAATCATATATGTACCCACCAGAAAAGAAACAGTGAAAATTGCAAATTATCTATGCA AGTTTGGCGTGAAGGCTGCGGCTTATAATGCAGGGCTTCCAAAATCACATCTTAGAAGGGTTCATAAGGAGTTTCATCAAAATAATTTAGAGGCTGTTGT TGCAACAATTGCATTTGGAATGGGAATTGACAAACCGAATGTTAGAAGAATCATCCACTATGGTTGGCCGCAGAGTTTGGAAGCCTACTACCAAGAAGCT GGCCGGGCTGGTCGAGATGGAAAATTAGCTGATTGCATTCTATACACAAACCTAGCAAGAATGCCATCACTTTTGCCAAGTAGAAGAAGTGAAGATCAAA CAAAACAAGCATATATCATGTTATCTGATTGTTTCAGATATGGAATGAATACTTCATGCTGTCGAGCTAAGATACTTGTCGAGTACTTTGGAGAGAATTT TGGTTCTCAGAAGTGTCAGTTATGTGATGTGTGTGTTGATGGACCGCCTGAAAGGCAGAATTTGAAAGAGGAGGCGAGTATTTTACTACAAACTATAGCT GCCGAATATGCACGCAACTATTCCATGGGTGACCCATATGATGACAGTATACATTTTGATTTGGAAGATAGAAGAAGATTTGGAGAGAGATCAAATCTTA CGATGTTTGTTGGAAAGATAAATGAGCAGTCTCCAAAGTTTTTAACCACTGCTATATTATGGTGGAGAGGTCTTGCTCGAATTTTGGAAGTTAAAGGATA CATTAGGGAGGGAGATGAGAAGACCCATGTTCAGATAAAATACCCGGAGCCAACAAAATTAGGATTGGAATTTGTGAAGTCAGGAAGTGAACAAGATTTC TATGTTTGCCCAGAGGCAGATATGTTGCTTGCAAAGGAAACTGCTAATAAGCCATATTCCTCATTCTCAGAATGGAAAACAGGTTGGGCTGATCCTGAGA TCCGCCGGCAGCGTCTGGAAAGAATGCAACTCAAAAAGACAACAAAGTTTCGCAGACCGAAAAAGAAACGAAAGAGGAACGCTGATAAACTGCGACCTGA TCTGAGGACTTCACGAGGTAGACTGTCAGCAAAACTTGCAAAAAATAAGTGATATGTCAAGGTCATCTTATTTAGTTATTCAGACACGTCATTTAACTCA CAAGTATAAGTGAATTGATCCATTGTAATCTCAATTTTGTCAAGAATAATTGTCAAGTTTTGACAGACAACATGGTTTTCATTCAATGACATTGTACCTA AATCAGGAAAATGATAAGGTATATTTTTGTTATTGATTTAATAGTAATGAGTAATGACTAATGAGTTACTTTTGTGATAATGATAAAATACCATTACATT GCAG
• Tissue: flowers
• Gene name: LI_gene_23541;
• Additional information: details;

Expression of Ll_transcript_220774

FPKM

• FPAB: 0.1
• FPNAB: 0
• LF1: 0.2
• LF2: 0.2
• LF3: 0
• LF4: 0
• UF1: 0
• UF2: 0.4
• UF3: 0.1
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_220774

• Blastp: ATP-dependent DNA helicase Q-like SIM from Arabidopsis with 54.34% of identity
• Blastx: ATP-dependent DNA helicase Q-like SIM from Arabidopsis with 54.21% of identity
• Eggnog: atp-dependent dna helicase(COG0514)
• Kegg: Link to kegg annotations (AT5G27680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452260.1)
• Pfam: Helicase conserved C-terminal domain (PF00271.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;