Ll_transcript_220778

Id TrinityFTRINITY_DN52025_c0_g2_i8
Name TranscriptLl_transcript_220778
SequenceGAAAATGCCACTTGATAGGTATATACAAAGATCCCGTTGCAAAATTGAATTGGCCCGATTCGAAATCCAAAGATAGTTGATGCGTTTTAGGTTTTTGGTT CACAAATTTTTCTAAATTCCATGGATGGCAACAATTTATCTTCCGATCAAGTCATTGCAGAAATGCTTGATATGGGTTTTGAGCATTCGAACATTGTTGA AGCCATAAAAGTTGTGGGCCCATCCATTACCAGTGTTGTTGATCATATCTTGAATGGTGCTAGTGTTGTAAGTAGAACTAACTGTGAAGCATCATCATCC ACTAGTACTGCTATCAAGTCTAAAGTTCATGCAAATAATGGGGAAGTTTTGAAAAAGAGAACTTTGCTGCCGTCCGGTCAAGTTCGACAATCGAGGATAC TCGATCATTTCCAACCCACCAATGGTAAAGTCAAAGAGAGCACGAAGAGTCATGTAGCTGTTGATGCAGTTGGCAATGTGGAAGAGCATAAGGAGCCTTT CTCCGAAGTGGTTGTTGATCCCTGTGTGATGTCGGGGTCAGTTGTAGCGGATTCTGAGGATGATTTGGATATTACATATGATTGGGAGAAGAAAGCTGGA ACTATCTTACAAAAGCATTTTGGTTTTTCATCATTGAAGAGTTTTCAAAAGAAGGCCTTGAATGCTTGGTTTGCACATAAAGACTGTCTTGTCCTGGCTG CAACAGGATCTGGGAAATCTCTATGCTTTCAGCTTCCTGCATTACTAACCGGGAAAGTGGTGGTTGTGATTTCGCCCTTAATAAGCCTGATGCATGATCA GTGCTTAAAGCTAGCAAGACATGGAATCAGTGCTTGCTTTCTCGGGTCTGGGCAACCTGACAATACTGTTGAACAGAAAGCTATGAAAGGCATGTATAGT ATAATTTATGTTTGCCCGGAGACCATCCTGAGATTGATTACACCACTGCAGGAGCTTGCAGAAAGTCGTGGTATTGCTTTATTCGCAATTGATGAGGTAC ATTGTGTTTCTAAATGGGGTCATGATTTCCGTCCAGACTACAGGTCTGTTTTATCCTTTCTATTTCCTCATATTTTATGGTTACTGAAAATGAAATGGAT CAGTTAGTGCACATAGAACATCTTAAACAATCACTACTTGTGGTTTGTATGCGAAAGAAACTAATAAGACAAACTGTTGGTTGATTCTATTGACTATCAC ATGTATCACCTCTGTTCTTTGTTTAGTCTTTAGCGGATACTTCACAATTTTGTAAAGGTCTTCATTCAACTGTCATAAGTATGACCTGTTTTTAAACGTC TTCTCTTGTTTCAGCCGTCTGTCTATGCTGAGGGAAAAATTTAATACCAGCAAGATGAAGTCCCTGAAATTTGATATACCTCTGATGGCCTTGACTGCCA CAGCTACAAAGAAAGTTCGAGAAGATATTTTGAAGTCATTGTGCTTGTCAAAAGATACTAATGTTGTACTCACCTCATTTTTTCGATCTAATTTACGCTT CACGGTAAAGCATACTAGATTGTCACAGGCTTCGTATGACAAAGATTTTCATGAATTGGTTGAAATATATGGTAGAAAGCAATATACTGATGAAAATAAA AGAGGTCTCATCTCAAAGGATTCAGATAATGTTTCCAACTCTGACACAGACGGTGATTCTCCTTATAATAAGGATGACAACGAAGACGACTATGCTGATA GAGATATTAATGTAATAGACTCAGGAAACAGGGAAAATATTAGAAAGGGTAAAGAATTGTCAGTTGAGTTCCTTGAAAATGACATTGATGACTTTCAAAG TGTTGATGACTGGGATGTTACCTGCGGTGAATTTTGTGCACAGCCTCCTCCCAATGAATGGGAGTCATCTGAGATAATTAATCCACCCAAGAAACCAGGA GGAAGACTTAGAATTCTTAAAGAACCTGTGCAAAAAGGACCGACAATCATATATGTACCCACCAGAAAAGAAACAGTGAAAATTGCAAATTATCTATGCA AGTTTGGCGTGAAGGCTGCGGCTTATAATGCAGGGCTTCCAAAATCACATCTTAGAAGGGTTCATAAGGAGTTTCATCAAAATAATTTAGAGGCTGTTGT TGCAACAATTGCATTTGGAATGGGAATTGACAAACCGAATGTTAGAAGAATCATCCACTATGGTTGGCCGCAGAGTTTGGAAGCCTACTACCAAGAAGCT GGCCGGGCTGGTCGAGATGGAAAATTAGCTGATTGCATTCTATACACAAACCTAGCAAGAATGCCATCACTTTTGCCAAGTAGAAGAAGTGAAGATCAAA CAAAACAAGCATATATCATGTTATCTGATTGTTTCAGATATGGAATGAATACTTCATGCTGTCGAGCTAAGATACTTGTCGAGTACTTTGGAGAGAATTT TGGTTCTCAGAAGTGTCAGTTATGTGATGTGTGTGTTGATGGACCGCCTGAAAGGCAGAATTTGAAAGAGGAGGCGAGTATTTTACTACAAACTATAGCT GCCGAATATGTAAGTTGAATGCTTCCGATTTTATACTGAAAAAACTTATTAATTCTGTTATACATGTGAATTTATATTAACATTTTGACTCTGGATTGTC GCAGCATATTTTAGATATGTGTGCCTCATTCTCCTCCATGTGTATTCTGCACGTGTCTATTTCTCTAGATTAGACTTCAATATGATAAATTGGTTAACCA AATGCATTGTTTTGTGGAGTTTCTGGATCAACTGTAGTCTTAAGAGCTCAAGTTCTATCCAACCTATACCCTGGCTCTGAAGCATGATAAATGTGAAACA GTCATGCTCCTATGATTGTACTTTCGACATTCTGTAAGACGAAAGAAACTAATGCAACATGGATGTTGGTTTTTCAGGCACGCAACTATTCCATGGGTGA CCCATATGATGACAGTATACATTTTGATTTGGAAGATAGAAGAAGATTTGGAGAGAGATCAAATCTTACGATGTTTGTTGGAAAGATAAATGAGCAGTCT CCAAAGTTTTTAACCACTGCTATATTATGGTGGAGAGGTCTTGCTCGAATTTTGGAAGTTAAAGGATACATTAGGGAGGGAGATGAGAAGACCCATGTTC AGATAAAATACCCGGAGCCAACAAAATTAGGATTGGAATTTGTGAAGTCAGGAAGTGAACAAGATTTCTATGTTTGCCCAGAGGCAGATATGTTGCTTGC AAAGGAAACTGCTAATAAGCCATATTCCTCATTCTCAGAATGGAAAACAGGTTGGGCTGATCCTGAGATCCGCCGGCAGCGTCTGGAAAGAATGCAACTC AAAAAGACAACAAAGTTTCGCAGACCGAAAAAGAAACGAAAGAGGAACGCTGATAAACTGCGACCTGATCTGAGGACTTCACGAGGTAGACTGTCAGCAA AACTTGCAAAAAATAAGTGATATGTCAAGGTCATCTTATTTAGTTATTCAGACACGTCATTTAACTCACAAGTATAAGTGAATTGATCCATTGTAATCTC AATTTTGTCAAGAATAATTGTCAAGTTTTGACAGACAACATGGTTTTCATTCAATGACATTGTACCTAAATCAGGAAAATGATAAGGTATATTTTTGTTA TTGATTTAATAGTAATGAGTAATGACTAATGAGTTACTTTTGTGATAATGATAAAATACCATTACATTGCAG BLAST
Tissueflowers
Gene nameLI_gene_23541; 
Additional informationdetails; 

Expression of Ll_transcript_220778

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_220778

BlastpATP-dependent DNA helicase Q-like SIM from Arabidopsis with 58.44% of identity
BlastxATP-dependent DNA helicase Q-like SIM from Arabidopsis with 58.21% of identity
Eggnogatp-dependent dna helicase(COG0514)
KeggLink to kegg annotations (AT5G27680)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019452258.1)
PfamHelicase conserved C-terminal domain (PF00271.30)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;