| Id Trinity | FTRINITY_DN52025_c0_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_220779 |
| Sequence | GAAAATGCCACTTGATAGGTATATACAAAGATCCCGTTGCAAAATTGAATTGGCCCGATTCGAAATCCAAAGATAGTTGATGCGTTTTAGGTTTTTGGTT CACAAATTTTTCTAAATTCCATGGATGGCAACAATTTATCTTCCGATCAAGTCATTGCAGAAATGCTTGATATGGGTTTTGAGCATTCGAACATTGTTGA AGCCATAAAAGTTGTGGGCCCATCCATTACCAGTGTTGTTGATCATATCTTGAATGGTGCTAGTGTTGTAAGTAGAACTAACTGTGAAGCATCATCATCC ACTAGTACTGCTATCAAGTCTAAAGTTCATGCAAATAATGGGGAAGTTTTGAAAAAGAGAACTTTGCTGCCGTCCGGTCAAGTTCGACAATCGAGGATAC TCGATCATTTCCAACCCACCAATGGTAAAGTCAAAGAGAGCACGAAGAGTCATGTAGCTGTTGATGCAGTTGGCAATGTGGAAGAGCATAAGGAGCCTTT CTCCGAAGTGGTTGTTGATCCCTGTGTGATGTCGGGGTCAGTTGTAGCGGATTCTGAGGATGATTTGGATATTACATATGATTGGGAGAAGAAAGCTGGA ACTATCTTACAAAAGCATTTTGGTTTTTCATCATTGAAGAGTTTTCAAAAGAAGGCCTTGAATGCTTGGTTTGCACATAAAGACTGTCTTGTCCTGGCTG CAACAGGATCTGGGAAATCTCTATGCTTTCAGCTTCCTGCATTACTAACCGGGAAAGTGGTGGTTGTGATTTCGCCCTTAATAAGCCTGATGCATGATCA GTGCTTAAAGCTAGCAAGACATGGAATCAGTGCTTGCTTTCTCGGGTCTGGGCAACCTGACAATACTGTTGAACAGAAAGCTATGAAAGGCATGTATAGT ATAATTTATGTTTGCCCGGAGACCATCCTGAGATTGATTACACCACTGCAGGAGCTTGCAGAAAGTCGTGGTATTGCTTTATTCGCAATTGATGAGGTAC ATTGTGTTTCTAAATGGGGTCATGATTTCCGTCCAGACTACAGCCGTCTGTCTATGCTGAGGGAAAAATTTAATACCAGCAAGATGAAGTCCCTGAAATT TGATATACCTCTGATGGCCTTGACTGCCACAGCTACAAAGAAAGTTCGAGAAGATATTTTGAAGTCATTGTGCTTGTCAAAAGATACTAATGTTGTACTC ACCTCATTTTTTCGATCTAATTTACGCTTCACGGTAAAGCATACTAGATTGTCACAGGCTTCGTATGACAAAGATTTTCATGAATTGGTTGAAATATATG GTAGAAAGCAATATACTGATGAAAATAAAAGAGGTCTCATCTCAAAGGATTCAGATAATGTTTCCAACTCTGACACAGACGGTGATTCTCCTTATAATAA GGATGACAACGAAGACGACTATGCTGATAGAGATATTAATGTAATAGACTCAGGAAACAGGGAAAATATTAGAAAGGGTAAAGAATTGTCAGTTGAGTTC CTTGAAAATGACATTGATGACTTTCAAAGTGTTGATGACTGGGATGTTACCTGCGGTGAATTTTGTGCACAGCCTCCTCCCAATGAATGGGAGTCATCTG AGATAATTAATCCACCCAAGAAACCAGGAGGAAGACTTAGAATTCTTAAAGAACCTGTGCAAAAAGGACCGACAATCATATATGTACCCACCAGAAAAGA AACAGTGAAAATTGCAAATTATCTATGCAAGTTTGGCGTGAAGGCTGCGGCTTATAATGCAGGGCTTCCAAAATCACATCTTAGAAGGGTTCATAAGGAG TTTCATCAAAATAATTTAGAGGCTGTTGTTGCAACAATTGCATTTGGAATGGGAATTGACAAACCGAATGTTAGAAGAATCATCCACTATGGTTGGCCGC AGAGTTTGGAAGCCTACTACCAAGAAGCTGGCCGGGCTGGTCGAGATGGAAAATTAGCTGATTGCATTCTATACACAAACCTAGCAAGAATGCCATCACT TTTGCCAAGTAGAAGAAGTGAAGATCAAACAAAACAAGCATATATCATGTTATCTGATTGTTTCAGATATGGAATGAATACTTCATGCTGTCGAGCTAAG ATACTTGTCGAGTACTTTGGAGAGAATTTTGGTTCTCAGAAGTGTCAGTTATGTGATGTGTGTGTTGATGGACCGCCTGAAAGGCAGAATTTGAAAGAGG AGGCGAGTATTTTACTACAAACTATAGCTGCCGAATATGTAAGTTGAATGCTTCCGATTTTATACTGAAAAAACTTATTAATTCTGTTATACATGTGAAT TTATATTAACATTTTGACTCTGGATTGTCGCAGCATATTTTAGATATGTGTGCCTCATTCTCCTCCATGTGTATTCTGCACGTGTCTATTTCTCTAGATT AGACTTCAATATGATAAATTGGTTAACCAAATGCATTGTTTTGTGGAGTTTCTGGATCAACTGTAGTCTTAAGAGCTCAAGTTCTATCCAACCTATACCC TGGCTCTGAAGCATGATAAATGTGAAACAGTCATGCTCCTATGATTGTACTTTCGACATTCTGTAAGACGAAAGAAACTAATGCAACATGGATGTTGGTT TTTCAGGCACGCAACTATTCCATGGGTGACCCATATGATGACAGTATACATTTTGATTTGGAAGATAGAAGAAGATTTGGAGAGAGATCAAATCTTACGA TGTTTGTTGGAAAGATAAATGAGCAGTCTCCAAAGTTTTTAACCACTGCTATATTATGGTGGAGAGGTCTTGCTCGAATTTTGGAAGTTAAAGGATACAT TAGGGAGGGAGATGAGAAGACCCATGTTCAGATAAAATACCCGGAGCCAACAAAATTAGGATTGGAATTTGTGAAGTCAGGAAGTGAACAAGATTTCTAT GTTTGCCCAGAGGCAGATATGTTGCTTGCAAAGGAAACTGCTAATAAGCCATATTCCTCATTCTCAGAATGGAAAACAGGTTGGGCTGATCCTGAGATCC GCCGGCAGCGTCTGGAAAGAATGCAACTCAAAAAGACAACAAAGTTTCGCAGACCGAAAAAGAAACGAAAGAGGAACGCTGATAAACTGCGACCTGATCT GAGGACTTCACGAGGTAGACTGTCAGCAAAACTTGCAAAAAATAAGTGATATGTCAAGGTCATCTTATTTAGTTATTCAGACACGTCATTTAACTCACAA GTATAAGTGAATTGATCCATTGTAATCTCAATTTTGTCAAGAATAATTGTCAAGTTTTGACAGACAACATGGTTTTCATTCAATGACATTGTACCTAAAT CAGGAAAATGATAAGGTATATTTTTGTTATTGATTTAATAGTAATGAGTAATGACTAATGAGTTACTTTTGTGATAATGATAAAATACCATTACATTGCA G BLAST |
| Tissue | flowers |
| Gene name | LI_gene_23541; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_220779
| Blastp | ATP-dependent DNA helicase Q-like SIM from Arabidopsis with 56.4% of identity |
|---|---|
| Blastx | ATP-dependent DNA helicase Q-like SIM from Arabidopsis with 56.26% of identity |
| Eggnog | atp-dependent dna helicase(COG0514) |
| Kegg | Link to kegg annotations (AT5G27680) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452258.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |