| Id Trinity | FTRINITY_DN52059_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_221258 |
| Sequence | AGTGGCCTTCCCTTTAGGGGCATCGATGCCTTTTCTACGAGAAGAGAGAAGAAGCTGCGCTGTCCATTTCGCCTTCATTTAATTTTCTATAATCTCTTCT TCCAACACCGTGTTAGATACGTTTATTTTGATGAGTAGTTTCTTCTGGTAAAGGAGTTATGGCGTCGAAAGGTCCTAGGTATAAGATTGATCATGATACA AAAGCGAAACGGCAAAAGGCCCTTGAAGCTCCAAGGGAGCCTAAGCGACCCAAAACTCATTGGGACCATGTCTTAGAAGAGATGGCGTGGTTATCAAAGG ACTTTGAGTCAGAGAGGAAATGGAAATTAGCACAGGCGAAGAAAGTTGCTTTAAGAGCTAGCAAAGGCATGTTAGATCAGGCTACAAGAGGTGAAAAGAA GATGAAGGAAGAAGAGCAGCGGGTAAGAAAAGTCGCACTGAGTATATCCAAAGATGTTAAGAAATTTTGGACGAAAATCGAAAAGCTGGTTCTTTACAAG CACCAAATGGAGCTTGATGAGAAGAAGAAAAAAGCACTTGACAAACAGCTTGAGTTTCTCTTGGGGCAAACTGAGAGGTACTCCACAATGTTGGCCGAAA ATCTTGTGGATGCTTATAAACCACAAAAGCAGAATTCTCCGGAGCTTCAAATGCGTACAGAATACAAGCATGTAGACGGAGACATTACTAATGAAGCTAA GGAAGTTAATGTTGAAGAGTATCCATCAGATGCACCTGACAATGATGAAGAATATGATGTACAATCTGATGATGAATCGGTGGATGATGAGCAAACCCTT GAGGAAGATGAGGCTCTTATAACTGAAGAAGAAAGGAAAGAGGAATTGGCAGCTTTGCGTGATGAAATTGATCTTCCAATTGAGGAGTTACTAAAACGTT ATGCTGGAGAGAAAGGTGAGATTTTTCTCTCTGAGGGAGTGAATGGAGAGAAAGGAGAACCAGAAAGGCAAGAAAGTAGTCCAGAGCATAGTAAAGATGC TGTGCAAATAATTAGAGCTGATGATGGTGATGAAAATGATGATATTTTATCTGTCAGCAAAGTTGTCTCTAGCAACTCCAGCATGTCCCCTGGTCGACGT TGTGACGAAAGTAATGGTGATAAAGCTACACAAGCAAGCAATCTATCTCAATATGAGGACCATCCACCTGAAAATCCTAGTGAGGTTCCCAGTGAGATGG CCAATGAAGTATTGCATATGACTTTAATGATGAAGAGGAAGATGCTGACTTCTTGCTTGGAACAGAAGATAAGTCTTAACTTCATTACAATGATCAGGAT GACGAAACAACCTTATCCGAGGAGGAGAAACTGGAAAGGGTTGACGCAATTGATCCAAGGGATGAGATTGCATTATTGCACAAGGAGAGTGACATGTCTG TTGAGGAACTCCTTGCAAGGTATAAAAAGGATCTGGGTGATAATGAAAAATGGGAAGATGATTCTGATGCTTCTTCTTTATCAGAGGATCATCGGGATCC TCCAGTTCATGAGGAAGCTGGAGCTGCTGTTTCTGTGAATGAAAATATCAAGTCTGGTGAGCACCTGGCTATTGTACAGTCCCAGGCAGAAGAACCTTGG GAAGCGCCTCCCGAGAATTCAGAAAAAACAGAAAGTGAGTATATCATTGCTGACGCAGCTGCTGCTGCAAGATCAGCACAGCCAACGGGAAACACCTTCT CCACAACTAAAGTACGTACGAAGTTCCCATTTCTACTCAAGTACTCTCTTCGTGAGTATCAACACATTGGATTGGATTGGCTTGTCACAATGTATGAAAA AAGATTGAATGGAATTTTAGCAGATGAAATGGGGCTTGGAAAAACAATCATGACTATAGCTTTGCTTGCACATCTGGCTTGTGAAAAGGGGATTTGGGGC CCACATCTAATTGTGGTACCAACAAGTGTAATGCTTAACTGGGAGACTGAGTTTTTGAAATGGTGTCCTGCTTTTAAAATTCTGACTTATTTTGGAAGCG CAAAGGAGAGAAAACATAAAAGACAAGGATGGCTGAAACAAAACTCATTTCATGTATGCATAACAACTTATAGACTAGTTATTCAAGATTCAAAAGTTTT TAAGCGCAAAAAGTGGAAATACTTGATCTTAGATGAAGCTCATCTCATTAAAAACTGGAAGTCACAGAGGTGGCAGACGCTCCTGAATTTTAATTCAAAA CGACGTATTCTCTTGACTGGTACACCACTGCAGAATGATCTCATGGAACTGTGGTCTCTCATGCATTTCTTGATGCCTCATGTTTTCCAGTCTCATCAAG AGTTTAAGGATTGGTTTTGTAATCCTATATCAGGGATGGTAGAGGGAGAGGAAAAGGTTAATAAGGAGGTTGTTGATCGCCTGCATAATGTCCTTCGTCC ATTCTTGCTCCGTCGATTAAAGCGAGATGTGGAGAAGCAACTTCCAATGAAACATGAGCATGTCATAAACTGTAGATTGTCAAAGAGGCAGCGGAATTTG TATGAAGACTTCATTGCTAGTTCAGAGACCCAAGCCACTCTTGCAAGTGCCAATTTTTTTGGGATGATTAGTATTATCATGCAACTTCGTAAGGTTTGCA ATCATCCTGACTTATTTGAGGGTCGTCCTATTGTCAGCTCTTTTGATATGTTGGGTATTGATATTCAGTTAAGCTCTTCTGTTTGCTCCATCCTTTTGCC CAGTACCTTTTCTACAGTAGACCTAAGAGGTTTAGGTCTTTTATTTACTCATCTTGACTATAACATGACTTCTTGGGAAAGTGATGAAATCCAAGCTATT GAGACCCCTACAAGTTTAATCATGGAACGTACTAATGTGGGTGACCTGGAAGTTATTAAGCCTGGACTGAAATCTCAAAAAAAGCTGCAAGGAACAAACA TTTTTGAAGAGATCCAAAGGGCAATTTGGGAAGAAAGGTTAAGACAGGCGAAGGAACGTGCAGCAGCTATTGCGTGGTGGAACTCCTTGAGATGTAAAAA AAGACCCATCTACTCAACCTCCCTAAGGGATCTTGTTAGCATAAAACATCCTGTATATGATATTCATCAGGTGAAGGCAAACCCTGTTTCATACTTGTAC TCAACAAAGCTGGCTGACATTGTCCTATCCCCAGTTGAACGATTTCAAAAGATGACTGACGTAGTTGAAAGTTTCATGTTTTCAATCCCAGCTGCACGAG TGCCTTCCCCTGTGTGCTGGTGTAGTAGAATTGAGACACCTGTGTTTCTGGATTCATCTTACAAGCAAAAATGTTCTGAAGTTCTGTCACCATTACTGTC ACCTATCAGGCCAGCAATTGTTCGCCGGCAAGTGTATTTCCCAGACAGGCGTCTAATACAATTTGACTGTGGGAAACTGCAGGAATTAGCAATTTTGTTA AGGAAATTAAAATCAGAAGGTCATCGAGCTCTGATATTTACCCAGATGACAAAGATGCTTGATATATTAGAGGCATTCATTAATTTGTATGGTTACACTT ACATGCGATTAGATGGATCAACTCAACCAGAGGAAAGGCAGACCTTAATGCAGCGTTTTAACACAAATCCCAAATATTTTCTTTTCATATTGTCTACCCG TAGTGGGGGTGTTGGTATCAACCTAGTTGGAGCTGACACAGTGATATTTTATGATAGCGACTGGAATCCTGCTATGGATCAACAGGCTCAAGATCGGTGC CACAGAATTGGTCAGACACGTGAAGTTCATATCTATAGATTGATTAGTGAAAGCACCATTGAGGAGAATATTTTGAAGAAAGCAAATCAGAAGCGTGCAC TTGATGATCTTGTTATACAAAGTGGGGGTTATAATACTGAGTTCTTTAAGAAGCTTGACCCTATTGAACTGTTTTCAGGTCATAGAACACTTTCTGTAAA AAATATCCAGAAGGAGAAAAACCAGAACAATGGAGAAGCTTCTGTAACCAATGCAGAGGTAGAGGCTGCATTAAAAGATGTAGAAGATGAAGCAGATTAT ATGGCATATAAGAGAGTTGAGCAGGAAGAAGCTGTGGACAACCAGGAGTTTACAGAAGAAGCCATTGGGAGACTTGAAGATGATGAGTATGTTAATGAGG ATGACATGAAGGATGATGAGCCTGTCGAATTCGGTGAATCTGTTCCCAGTTTAAGTAAAGAGAACTTGTCAATGTTAAATGGTAATGATCCTACGGAAGA TAGACCACCCTCTGTTCCTAACAAAGAAGACGATGTTGACATGATTGCTGATGTCAAGCAGATGGCTGCTGCTGCAGCTGCAGCTGGACAAGCAATCACA GTGTTTGAGAGTGAGCTACGTCCTATTGATCGATATGCCATTCGTTTTCTGGAGCTGTGGGATCCAATTATAGATAAAACTACATTGGAATCTGAAGTCA GGATTGAGGACACAGAATGGGAGTTGGATCGCCTTGAAAAGTTTAAGGAGGAGATGGAGGCTGAAATTGATGAAGATGAGGAACCTCTTGTGTATGAAAG TTGGGATGCTGATTTTGCAACTGAGGCATATCGGCAGCAAGTGGAGGCCTTAGCTCAACATCAGTTAATGGAGGAACTCGAATATGAAGCTAAACAGAAA GAGAAAGCTGAGGAAGAAAATTGTGATTCTAAAATGACTCAAACACCAAGTGATTCAAAGCCCAAATCTAAAAAGAAACCCAAGAAAGCAAAGTTCAAAT CTCTGAAGAAAGGATCGTTAACATCTGGCTTGAGATCTGCAAAACAAGAGCCACAAGCGGATACAATGACTATAGATGATGAGGATGTCAACAGCTTGGC TTTTGGTACTCCAGAGTCAACTTCGCAGAAAAAACGTAAGATATTGAAGCCAACAACTGATGGTGAAGAAAAAAGACTGAAGAAGTCCAAAAAGATGAAG AGAAAATCTCCTGACATTTGTGCTTCAGATTTAGATTCCAACTCATTAATTGTGCTGGATGAACACACAGAGTCAAAGCTGGGTGAAAGTCTGGTTGATT TTGAACAGAGAATGGCAGGCAGGAGTAAGATGGGAGGAAAAATATCCATTACTCCAATGCCAGTAAAACGGATATTGGTGATAAAACCGGAAAAACTGAA GAAGGGAAATCTTTGGTCCAAAGATTGTATTCCATCAGCTGATTTTTGGTTGCCTCAGGAAGATGCAATATTATGTGCCATAGTTCATGAATATGGTTCT AACTGGAATTTGGTTAGTGAAACACTTCATGGCATGACTGCAGGGGGGACATTCAGGGGGAGATATCGCCATCCTGTCCATTGCTGTGAGAGGTTCAGAG AGCTATTCCAAAAATATGTCTTGCACTCGACGGACAATGCAAATCATGAGAAGATCAGCAACACTGGCTCAGGAAAGGCTCTTCTTAAAGTTACAGAGGA TAACATTCGGATGTTGTTAGATGTTGCTTCTGAGCAGCCAAACAGAGAGTTACTACTGCAGAAACATTTTTTTGCATTGCTGTCGTCTATCTGGAAGGTG TCAGCACATGTTGACCGCAGGCAGAATCCATCACCTACTTGTAATGGTCTCTATTTTGATCAGAGTTTCTTTACTTCCAAATGCCAACAATCACAGAATT CCTTGAAGAAACCCTCTGAAAGGATTATGTTTACTAATTTGGCCCAGAGCAAGAAATTAATAGCTGCTGCTCTGGATGACACAATAAGTAGGTCAGAGAG TGACAAAATCCTCCCAGCTAATCAGGGTAAAGAAATGCCATTGAGTGCAGATAAGCTGGATATAACATTGGAGTTCCAGAAAGAGGAGAGTGATGTCTTA TCTTCATTTCCATCTGTTATAAATTTATCAATTGATGGGATTGGAGCTTCACCATCTTTAAATAAGCAAACAGGAGAATGTGACCATCTCAGAGGTTGTC TGTCTGCTGCTGAGAATCGTTTCAGGGAGGTATCAAAAACTTGTGAGGAAGACAGTCCTGGATGGGCTTCATCAGCATTCTCGACAAACGATTCAAGGTC TCAACCTGGATCCAGGATACAATCCTTGGGAAAGCAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_23656; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_221258
| Blastp | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 from Arabidopsis with 65.93% of identity |
|---|---|
| Blastx | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 from Arabidopsis with 74.06% of identity |
| Eggnog | chromatin modification(ENOG410XP0A) |
| Kegg | Link to kegg annotations (AT3G12810) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414895.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |