Ll_transcript_220927

• Id Trinity: FTRINITY_DN52093_c0_g1_i4
• Name Transcript: Ll_transcript_220927
• Sequence: CCACCGGAATTCGCAAGAGATCTTTTGCCCAAACACTTCAAGCACAACAATTTCTCAAGCTTCGTTAGACAGTTAAACACCTATGGTTTTAGGAAGGTCG ATCCAGATCGTTGGGAATTTGCAAATGAGGGCTTTTTGAGGGGTCAAAAACACTTGCTTAGGAGTATAACTAGGAGAAAACCTGCCCATGGTCATAACCA ACAACAGGCTCAGCAATCACATGCACAGAGTTCATCACCAGTAGGGGCATGCGTAGAAGTTGGTAAGTTTGGGCTAGAGGAAGAGGTTGAGAGACTTAAA AGAGATAAGAATGTGCTCATGCAAGAACTTGTGAGGTTGAGGCAACAGCAACAGACCACTGATAACCAGCTGCAGTCTATGGTTCAGCGCCTTCAGGGGA TGGAGCAACGACAGCAACAAATGATGTCATTCCTTGCAAAAGCTGTCCAGAGCCCTGGTTTCTTTGCTCAATTTGTACAACAGAAAAATGACAGCAACAG GCACATAACTGAAGTCAACAAAAAGCGTCGGCTCAAGCAGGAAGGTATTTCTGAAACAGAGCATGCTGCTGCTCCCGATGGACAAATTGTTAAATATCAA CCTGTGATGAATGAGGCAGCAAAAGCAATGCTAAGGCAGATCATGGCGTGGGATGCTTCTCGTGTAAAATCGTTTAGTAAAAGCCCTGTTAGTTACTTAA TTGGTGATGATTCACCGCCACCCAGTACATTGGATAGTAGCAGCTCCTCAAGCCGGGCTTCTGGAGTAACACTTCAAGAGGTCTCTCCAGCTTCTATGCA GTCTTCTCACATTCCTACTGCAAAGGGGATACAAGGGCACATCCCACCTGAAAATCTATCTTCAACGCAAACTGCAGCTTCTGAAAAAGTTACGAAGGTT GGAGTGCCGGAGGCACCTTCTATCTGTGTCCCTCAAGCAGATATGATCATGCCTGATCTTTCTCCCATAACAGGAAATATTCTTGATATTCCTGACGAAA ATTTAATGTGCCCTGAGACAGGCAGCGACACATTTATGGATCCTACTTCATTGGGGGCCAGCGAGTCATTTCCCTTAGACTTCGACGGTATTCCACCTGA TGCAGACATTGAAGATTTCTTAGGCAATCCTTCTATTTGGGATGATTTTTTGCAAACTCCAGTGTCAGAGGATATTGAGACTGATGTTGCTGAAGTGTCA GAAGGGAATGAGGTGCAGCCAACAGGAAATGGATGGAACAAAACTGAACATTTGGATCAACTTACAGAGCAGATGGGAACTTCTTTCATTTGATGCAAAA AGAGGTTGATTGTGTATGAAATTTAGATTAGTCTTTCACAATGTCTAAGGTAATCCCTGACCCAAACAATACTCAAATGATGTTTGCTGAAGGCCTCTGA AAAATATACATCAATTTTTCTTTGGAAGATTTACTTCATGAGCATTATTAAAGGGCAGAAACGATGAATGATATTGGTTACCATGTCAAGCTGCTTTTCC TTCTCAATTTCCTTTACACTTTCTTAATGTCTTCTTTGTGAAAGTGAAAATTGAAGAACTGAAGGAGAATTGAAAATTAGCAATGTATTGAGGTACATTA AATCCATCGATTCATTGCAGACTCTTCTCTTCTAAATTTAATTTATGACATAAGTTTAATCCAATAATAATATGTAGTCATGCGTTGAAGAGAGTAGACT TTAGAAATCTTCTATGAGCACGTGGAAAATTTCTTTTATCACAACATAAACCTAGATGGTTGAATTTCCATCCACACTCAACTATTTTTGGTCTGCATCA AAGTGTTTCACATTTTATAATAGGAGATTAATCTTTTTGACATGTGTAGATCATTAAATTATAATTTATCTTTAAACATTTTTCATACATATCTCTACTG AACCAC
• Tissue: flowers
• Gene name: LI_gene_23789;
• Additional information: details;

Expression of Ll_transcript_220927

FPKM

• FPAB: 20.9
• FPNAB: 13.3
• LF1: 12.2
• LF2: 17.3
• LF3: 15.8
• LF4: 14.5
• UF1: 12.5
• UF2: 16
• UF3: 15.8
• UF4: 15.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_220927

• Blastp: Heat shock factor protein HSF8 from Lycopersicon with 54.01% of identity
• Blastx: Heat shock factor protein HSF8 from Lycopersicon with 52.5% of identity
• Eggnog: Transcription factor(COG5169)
• Kegg: Link to kegg annotations (101263626)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424141.1)
• Pfam: HSF-type DNA-binding (PF00447.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;