| Id Trinity | FTRINITY_DN52109_c0_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_174538 |
| Sequence | AAAAAGTAAAATAATTGCATTTATTATATATTGGGAAAAAAACGAGAGTGTGAAGCTAAAAAAACAAGAAGCAGAAAGAAGAAAAAAGAAAGAAGCATGG TTTCAACGAGACGCAGTGGATCTCTCTCTGGTAACAGTTCCAAAAGATCTTCTTCTTCTTCATCCGAAGATAAACCTCCTTCACCGAAGCGTAAAAAGGT CGACAATGGCGGTTCGCCGGAGAAACCGATGCCAGTGGCGGGAAATTCCAAAGAATTGCGTACTCCTGAGACGGCGCCTGACCCCGGAGGATGTGACTCC GGCGTTGTTAAGATTGCCGGAGATGGTGGAACTGATGCTGTGAGTTCAGGCAAAGCTGATGCTACCGCCGCTGCAGCTGTGGTGGCGCCGGTTACTGATG GTTCTTCGCCGATTGATAAGGCCAAGTGTGCTATCTCTTCTTGGATTACATGTAAGAAGCGAAGTCCTATATTTGAGAGTCCTGCACCGTGGGGCAGACT CTTGTCACAGTCTGCACAGAATCCAAATGTTGCCATTCGCACGCAGAACTTCACGATTGGTTCTAGTAGAAATTGCAACTTCCCATTGAAAGATCAAACT ATAAGTGGGAATTTATGCAAGATCAAGCATACCCAGGGGAAGGGAAGTGATGTAGCTTCGCTAGAAAGTACAGGCAGCAAAGGGTCCGTTCTAGTAAATG GGATTGTTGTCAAGAAGAATACCAGCTGTGTTCTTAACTCGGGTGATGAGGTGGTTTTTGGTTTGCTGGGAAAGCATTCTTATATTTTTCAGCAACTAAA TACTGAGGTTACAGTCAAGGGTGCAGAAGTCCAGAGTGGTGTTGGTCAATTTCAGGAAATTGAAAGGAGAGCTGGAGATGCTTCAACTATTGCTGGGGCT TCTATCCTGGCTTCTCTTTCTAGCCCCAGACAGGACCTCACAAGATTGAAATCTCCAACTGAAAGTTCTAGTAAACCTCACGTGGATGCCTCTAATCATT CTGTTCTTCATGGTGGTGTAGAAATTGAGATTAATGCCTTGGAATCTAGTCCAAATGTGCGGAGTGCTAAAGCAGCTGATGTCGGAGCAAGCGAAAAGGA TTCACCAATGGATTGTGATCTAGATGCTAGCACAGAGGCAGACAATGTATTGGAAGAAATAAATGGGATGCGAGATAGGCAGGCTGCATCGACTTCGAGT AAATATGTGCGCTGTGCAGTATTTAGAGAAGATGTTTGTGCTGCAATACTGGATGGAAAAGAAATAGATGTGTCTTTTGATAACTTCCCCTACTATTTGA GTGAAAATACAAAAAATGTCCTGGTGGCAGCTTGCTTTATACACCTAAAGCATAAAGTTAAAGAACATGAAAAGTACACTGCAAATCTTACAACTATAAA TCCTCGTATTCTGCTCTCAGGACCTGCAGGGTCAGAAATCTATCAGGAGATTTTGGCAAAAGCGCTTGCAAAATACTTTGGAACTAAGTTGCTCATATTT GATAGCCGTTCACTCTTGGGTGGTTTATCCTCCAAGGAAGCTGAGCTACTCAAAGATGGATTTAATGCCGAAAAATCCTGCAGCAGCACCAAACAAAATC TCACAGACACAGATTTGGCTAGGAGCATGAATCCATTAGCTAGTAAAACAGATATGCCTAGCTCTTCAAATGTACCTGCATCATCTGGCCTTGAGTTTCA ACTTAAGTTGGATACTGATAACATGCCAGCTACCTCTGGAACAGCCAAAAATTGCTTGTTTAAACTAGGTGATAGGGTCAAATTTAGCTCTTCATCTTCT TGTGGCTTGTGTCAGACATCTTCAAGGGGCCCACCTAATGGAAGTCGGGGAAAGGTTGTCTTACTTTTTGATGCTAACCCGTTGTCTAAAATTGGTGTGA GATTTGATAAATCCATACCTGATGGAGTTGATCTTGGAGATGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTCAATGATCTACAAATGGAAAACAG TGGTGTGGAGGAACTGGACAAATTACTTATTAATTCGTTGTTTGAGGTTGTTTACATGAGAGCAGAAGTGCACCATTCATTTTGTTCATGAAGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_23845; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_174538
| Blastp | E3 ubiquitin-protein ligase CHFR from Homo with 35.2% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase CHFR from Homo with 35.2% of identity |
| Eggnog | zinc ion binding(COG5243) |
| Kegg | Link to kegg annotations (55743) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463547.1) |
| Pfam | FHA domain (PF00498.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |