Ll_transcript_173840

Id TrinityFTRINITY_DN52114_c0_g2_i1
Name TranscriptLl_transcript_173840
SequenceTGGCCGAAAGAATCAATAGAACCATTATGGAAAAAGTAAGAAGTATGTTGAGAATGACTAAAATGTATAAGCCATTATGGGGTGAAGTTGTTCAAACCGC GTGCTACCTGATTAACAGATCTCGTTATGTTCTCTTGGGATTTGACATTCCTGAGAGAGTATGGTCTGGACATGATATTAAATACTTTCGTTTGAAGGTG TTTGGATGCAAAGCCTTTGCTCATGTAAGTAAGGAGCAGAGACAAAAACTTGATGATAGAGCCACACCTTACATTTTTCTGGGCTATGGAGATGAGGAAT TTGACTACAAGTTATGGGATCCGGAAAAGAAGAGAGTCACTAGAAGCAGAGATGTAGTGTTCCATGAGCAAGAAACTATGTCAGATTCTGCGACTCTAGA GAAAACTAGGAAACCTGGTGGTAATGTTGATTTTACACCAGTCTCTCTTCCTAGAGAAAATGCCATAGGAGGGGAAAGTTAAATGACCATGGGGTTGATG ATGAGCCAAAACCAGATGATGTTGGAGAAGAAGAAAGTGTTGAGCAGGGGGAGCAACCCCCTACACTGCAACTTAGGAGAAGTGATAGAGAGTGACTTCT GTCCAGCAGATACCCCAGTTCGGAGTATATCCTTCTCACTGATGAGGGGGAGCCAGAAAGTTTAGATGAAGTTCATACTCATAAGGATAAATTTGAATGG ATGAAAGTCATGCAAGAAGAGATGGATTCCTTGCGGAAGAATGATACTTATGAGCTTGTGGAACTTCCTAAAGGCAAGAAAGCATTGAAGAACGAATGGG TGTTCAGACTAAAGAAAGACGGTGATCAGCTAGTCAAATATAAAGCTCGCTTGGTCGTGAAAGGTTTTGGACAAAAGCGAGGAGTAGATTTTGATGAGAT TTTTTCTCCTGTTGTCAAAATGAGTTCTATTCAAGTCATGCTCGGATTGACAGCTAGCTTGTATCTAGAGCTTGAGCAGTTAGATGTGAAGACTGCATTT CTACATGGAGATTTGGAGGAAACAATCTACATGGATCAACCTGAAGGATTTGAAGAATCTAGAAAATAGAACATGGTTTGCAGATTGAAGAAGAGTCTGT ATGGATTAAAGCAGGCTCCTAGACAATGGTACAAGAAGTTTGA BLAST
Tissueflowers
Gene nameLI_gene_23862; 
Additional informationdetails; 

Expression of Ll_transcript_173840

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_173840
BlastpRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 78.15% of identity
BlastxRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 73.03% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_014617136.1)
PfamReverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;