| Id Trinity | FTRINITY_DN52124_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_174050 |
| Sequence | GACTCCTCTCGACTAATGGAGAGACAAATGATTTTTTCTTTTGTATTTTCATGGTAAAAGTGTAATATCATTTTAAATATAATGGATATAAATATTAATA TGAATTGTTTTTTCTTTACTTTTATATAGCACTTATGGAGAGGAGTCTCACTCAAAATTAAGAAAAATGATTGGAATCTAATAAATTAATATTAAAATTT AACCTACATTTATGCATATTATAAACTAAAATTTCAAGCTAAAGAATTTCGGCCTTTGAAAAAATCTAAACAAATGTCCTTAACTAAAGTACCATCGAAA TACGTGGACATTTGGAATATGAAATAAAGCCCAGCCCAACACTATTGAAATTCATATAAGCTCAATATCAATACTTTATAATATCTATAAACTATAATTT TTAATCAATCAATTAACTATACCAATATTATTATTAGTTAGAATGTGTAGTACATTTGAACCATCAAGTTAATTTTACGTTGCTTTGAATTAGCTTCGGG GCTGAAAGTTAATGCTCACAAGAGCTCTTTGTTTGCTATTGGTGTGGTGGATTCTTCTGTTAGAGAAGCTGCAGAGTTTTAATGTTGCAAAATTGGTTAT ATAACTTTTCTATATTTAGGGGCCCCTGTTGGGGCTAATCCGAGGAGAGTAGAAACTTGGAATTCCACGATCACAATAATAAAGAATAAGTTGGCATCTT GGAAGTGCAAGCATATTTCATTTGGTGGAAGGTTGGTTCTTTTAAACTCAGTTTTATCTAACATTCCTACTTATTTATTTTCTCTTTACAAAGCTCCAAA GAAAGTTTTGATGAAAATTGTTTCTCTTCAACGAAAGTTCCTTTAGGGAAATTACAAGGGTGAGAAAGGTATTGCTTGGGTGGCTTGGTCGGAGGTTACA AAGCCAAAATTTCTTGGTGGCTTGGGGGTTCGTGATCTTTCAAAGTTTAATGAGGCGTTTCTTGCCAAGTGAAAGTGGCATAGATTACAAGAGAATGAGG CTCTCTGGGTAAATGTTATTGACTCAAAGTATGGGACATCTTCAGATACTTCAGTTCGGCCTAGATTGTGAGCTTCTAATTGGTGGAAGGATTTATACAA CATAGGCGGTAATTGGTTTGGACATCATATTTGGAATGACATTGGAGATGGTATGGATACTTTGTTTTGGTTAGATATTTTGATTGGGAATCAAAGCTTG AAGGAGATGTATCCTAGAATTTTTTTACTTGCGTCTAATCGATCGATTTTGGTTGCTGAATGTGGCTCTTGGAGAAATGACATTTGGGTCTGGGATGTAA AATTTCACAGAGTTCTTTTTTATAGGGAACAAGGCTTACTTAGGGATTTTCTATCTCTCTTGCAGAACCACTCGTGTCTCAGAGATAAACAGGATTTGTG GTGGTGGAGTGCAGACTCTTCCAAATCTTATTCTGTCAACTCTGCTTATCTTTGTCAGGTTGATCAAACTCCTAATTTTTCAGGTACTCATCAATCTAAA GCTTGGATTCATTGTGCCCCTTCTAAAGTGTGTTGTTTTGTCTGGAAACTTATAAGAGGGCGTCTCCCTTCGAGGGTGGAGTTACACAAGAGAAATGCTA TTTCTCCATCTACAGAGATCCATTGTGATTTTTGTCTATCCCACAAAGAATCTGTCGAACATCTTTTCATTTCGTGTGATTTTTCTTCATCTGTTTGGAA AGGGGTTTACTCTTGGCTTCAGGTACCTGTTCCATCTACAAACTCTATCATAGGCTCCTTCAACTACCACGAGGACCTTGGTAAAAAGTTAAGGGGTACA AAGCTTTGAACAATGGTGTGGTTTGCTGTAGTCTGGTGTATCTGGCTATTGAGAAATGAAATCATTTTTTCCACTAAGGAAGCTAGTTTTTTGCACATTA TGGATTTGATTCAGGCAAGATTCTGGAGTTGGTTTGTTTCTAAAGTAGGACCAATTTCTTCTTCTATTTCTTTTGCCAACTGGTGTAATGATCCTTCTGT TTGTATTTCAATGTACTCTAAAAAGATCAGTCATTGATCTCCTTGTATTGGGTTAGCACCCCTTGTGCTTTTTCTAATACATTTTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_23923; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_174050
| Blastp | - |
|---|---|
| Blastx | Putative ribonuclease H protein At1g65750 from Arabidopsis with 25.35% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418409.1) |
| Pfam | zinc-binding in reverse transcriptase (PF13966.5) |
| Rfam | - |
| GO | - |