Ll_transcript_173888

• Id Trinity: FTRINITY_DN52134_c0_g1_i7
• Name Transcript: Ll_transcript_173888
• Sequence: GTATAATCATCGTGCATGCAATTTGTGCCTCTTTCTCTCTCTCTCTCTCTATTTTTTCTCCTTTCTTATATTTCTGCATGCACACGCCTTCTCTCTCTTT CTCTCTCCGTCTTCGTTTTCTCTCTCTCCGGTCACCGTCAATTCAAATTCAACCGTTTTCTCTGTCTCCGGTCAGATTCCGACCACTTTCCGATCAACAC TCCCTCCACCTCCGCAAATGCAAATCCAAAACCACACCACCCGCCGCCACAGCTTCTCTCTCTAAAAAAATCACTGAACAACGAAACTGCTTCTGATTAA CTTCAATTAACCGCTACCACCAACTCCACCTTCGTTCTTCGGTTTAATTTCGTGAAGTGGAATTGAGGTTGAAAATGGAGTCAAGGAGTTGTATGAACGT GGCGTGTGCCGCCACAACGTCGATCCGGTGGCGCAAAGGTTGGGCCTTGCGGTCCGGCGAATTAGCCGAGCTATGTGATAAGTGCGGTTCTGCTTATGAA CAATCAACATTTTGTGATTTGTTTCACTCAAACGATGATGGTTGGAGAGAGTGCACTCCATGTGGAAAGCGACTCCATTGTGGATGTGCTGCCTCTTTGT CTCAGCTTGAGTTACTAGATCTGGGTGGTGTAAGCTGTATAAATTGCGCGAAGAATTTCGGAATTCAACCTGTGGCAACTACTGAAAAGACTAATGGATC TGGGACATCAAAGGTAAAAAATGTCAGTGAACAACATTGCATATCTCTGGCTAACCAATTAAATGCGAGGGGTATGCAATTAGGGCATTATGCAGAGAGC GATGGGCTGAGGTGCTGGCTCAAAGCACATAATAATGTTGACACAAGTGGGACTTCTGCAGAAATGAAACTGGAAGAAGTTTCACCTTCGGTTGAAGATA TTGGGAACACTTTGATATCACAATTTCGTCGTGAGTTTAATGGATCATCTAAGGCTGCCAAAGCAGACAACAATAAGTCAGACATGGAAAGGCGAGATAT ATATGAATCATTGGCACAGACAAATTTGAGTATGACCCTTGCTACTCCATTAGGAAACTCAAATCCCTTTCAGAGAGCTATTGTTGTTGAAAGGGAACAA AGTAAAACAGCGCCTCCACTTCTGTCAGGGTCTAGGTCTCGCCATCTATTACCTAAGCCCCCTAGGTCAACTCTTGCTGTGGGCTTAGAAGCAAATACAG GCATGCAATCCCAGATTCGTGTAGCAAGGCCTCCTGCTGAAGGACGGGGAAGGAATCAGTTACTTCCGCGTTATTGGCCTAGGATTACAGATCAAGAGTT GCAGCAAATATCTGGAGGTTCAAATTCCACCATCGTGCCACTCTTTGAGAAGATGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTGGTTTTACCA AAAGCATGTGCTGAAGCCTATTTTCCTCACATCTCTCAAGCGGAGGGCCTTCCTTTGCGAATCCAAGATGTGAAGGGAAAAGAATGGGTGTTCCAGTTTA GATTTTGGCCAAATAATAACAGCAGGATGTATGTTTTAGAAGGTGTAACTCCGTGCATCCAGTCAATGCAATTGCAAGCTGGGGATACTGTAACATTCAG CCGTATGGACCCTGAGGGGAAACTTGTGATGGGGTTTAGGAAGGCAATTAATTCTTCAGCAGTACAGGACGCTCATCCATCTACTGTGCCCAATGGTTCT CATTCAATTGAAACTTCCTACTCTGGTGTTTATGAGAATTTACCTATATTAAGTGGTTCTGGCCTTCTTCAGTCACAAAAGGGAAGTTCAGAGACCCATC TACATATGCTGTCTAAAGAATGGAATTCAGCTGGTGGTGACATGAACTTGCACAATATTGAGATGCCTGAAAGCAGGAAAAGAGAGGGGATGCTTTTCCC AGCTATGATGGTTCCTGAGAAGAAGAGAGCTCGAAATATTGGGTCAAAAAGTAAGAGATTGCTTATTGAAAGCCAGGATGCACTGGAGCTGAAACTTACA TGGGAAGAGGCTCAGGATTTGCTACGTCCATCTCCAACAACTAAGCCAAGCATTGTAATGATTGAAGATCATATATTTGAAGAGTATGAAGAACCTCCTG TCTTTGGTAAGAGGAGTATATGTGTAGCTCACTCAACTGGGATAAATGAGCAGTGGACACAATGTGATATGTGCTCAAAATGGCGGAAGTTGCCAATTGA TGTGCTTGTTCCTCCTAAGTGGACATGCACAGAAAATTTATGGGATCAGAATAGGTCTTCATGTTCTGCTCCCAACGAATTGAATCCAAGGGAACTAGAT AATCTGCTGAGACTGAACAAGGAATTCAAGAAACAAAAAGTGGCAGCAAGCTCCAGACAACTGGCACTTGAATCTTCTGGACTGGATGCTTTGGCGAATG CTGCAACCCTTGGAGATGATGCAGGTGACCCTGGCAGCACACCGGTCGCTACCACCACAAAACACCCTCGGCATAGACCTGGGTGCTCCTGCATTGTGTG TATCCAACCACCAAGTGGGAAGGGTAAACACAAACCTACATGCACCTGCAATGTGTGCATGACAGTTAAGCGACGGTTTAAAACCCTAATGATGCGGAAG AAGAAGCGTCAATCTGAACGTGAAGCAGAGATTGCTCAGAGAAATTCGAAATCATTGGGGACCAAGGATGAAGCAGAAGTAGACAGCACCTCTCTTTTAA CTCCAGTTGATGGTTCGGAGAATGGAGCAAGGGTGCCAAATGAGTTGGACTCAAGCAGTCAAAACCTCATGGCTGAAGCTGCGAAGGGACAATTAGACTT GAATTGCCAACCTGACCGAGAAGACATGCAAGCCGGGCTAAATAATAATGTGAGCATGATGAGTCTTCTTCAAGAAGCAAATCTCCCTCTGGAGACCTAT ATGAAGAAAAATGGCATTACTAGCTTGACATTGGAGCAGCAAACAAATTCAGCTTCAAATGTGCCGGCACCGACAACCAATGAGAGTGAGGGAAGACATA ATGAGGATTGCTTTACTGCTTCTGCTGCTAATGAGCAGGAAAGCAGCCCTGAATTGAATAGTGAGCAGGATAAAGGTCAGAACAATTCACAGTCATGAAG TCCAGTCACCACCTTCATTTTCTTTATCCTTTTTTTTACTCGAAAATCATTTTACAAGAAACCTTCTTGCATGAATTATAGGAGGTTCATTGGGATGTCT TTTGCTTTTTGTGTCTTATGATTGTTAATTAAACAAACCCATACAAACTCAATAACCTACATATACTAAAGTTTGCCTTATAGACTTTGTAAACATCTCC TTGCCAAGTCATAATACACCTGGGTTTGTTTCTCTAGAATGTGTTGAAGTATGAATAGATATTCTGTCTTTGCTTCTTATTTGGTTAAAGGGGGAGGGCA CTAATCTGATTCTTTAGCACGTGGTATAAATTTGAGTAGCCATTGGTGGTTCTTCCTCCTCTGACATCAGGAAAAGACTTTGTAATTGCC
• Tissue: flowers
• Gene name: LI_gene_23968;
• Additional information: details;

Expression of Ll_transcript_173888

FPKM

• FPAB: 6.6
• FPNAB: 3.7
• LF1: 2.9
• LF2: 3.8
• LF3: 3.4
• LF4: 3.7
• UF1: 2.1
• UF2: 3.3
• UF3: 4.7
• UF4: 3.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_173888

• Blastp: B3 domain-containing protein Os07g0679700 from Oryza sativa with 49.09% of identity
• Blastx: B3 domain-containing transcription repressor VAL2 from Arabidopsis with 49.19% of identity
• Eggnog: B3 domain-containing protein(ENOG410Z235)
• Kegg: Link to kegg annotations (4344293)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464098.1)
• Pfam: B3 DNA binding domain (PF02362.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;